RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ITGB5P18084 799 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 EPHB4P54760 987 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
SEC13-208ENST00000397109 MTMR1Q13613 665 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 C7orf31Q8N865 590 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 SH3GLB2Q9NR46 395 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 CYP2C9P11712 490 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 SREBF1P36956 1147 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 BFSP2Q13515 415 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 PTGISQ16647 500 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 PSRC1Q6PGN9 363 aaPredicted RBP16.62■□□□□ 0.25
SEC13-208ENST00000397109 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
SEC13-208ENST00000397109 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
SEC13-208ENST00000397109 GPR20Q99678 358 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 C16orf70Q9BSU1 422 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 ALG1Q9BT22 464 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 IL23AQ9NPF7 189 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 GTF2IRD1Q9UHL9 959 aa16.62■□□□□ 0.25
SEC13-208ENST00000397109 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 KCNA2P16389 499 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 CCL23P55773 120 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 H3BRB1 525 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 CDKL5O76039 1030 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 DEXIO95424 95 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 LGALS2P05162 132 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 ZNF76P36508 570 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 STK3Q13188 491 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 CEP55Q53EZ4 464 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 TMEM240Q5SV17 173 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 SNX21Q969T3 373 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.254e-14■■□□□ 12.8
SEC13-208ENST00000397109 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
SEC13-208ENST00000397109 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
SEC13-208ENST00000397109 UMODL1Q5DID0 1318 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 ATP9AO75110 1047 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 PFKMP08237 780 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 RABEP1Q15276 862 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 NIPA1Q7RTP0 329 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 SEPT1Q8WYJ6 367 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
SEC13-208ENST00000397109 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
SEC13-208ENST00000397109 MEIS1O00470 390 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 PFKFB2O60825 505 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 FGBP02675 491 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 CYP3A4P08684 503 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 RFC2P35250 354 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 NLRP5P59047 1200 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
SEC13-208ENST00000397109 SP4Q02446 784 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 C16orf59Q7L2K0 433 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 VPS54Q9P1Q0 977 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 LAMA3Q16787 3333 aa16.59■□□□□ 0.25
SEC13-208ENST00000397109 ACRP10323 421 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 AK2P54819 239 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 SCRN1Q12765 414 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 PTK7Q13308 1070 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
SEC13-208ENST00000397109 FAM109BQ6ICB4 259 aaPredicted RBP16.58■□□□□ 0.24
SEC13-208ENST00000397109 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 HERVK_113Q902F9 699 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 SCLYQ96I15 445 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 TPCN1Q9ULQ1 816 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.24
SEC13-208ENST00000397109 NFASCO94856 1347 aa16.58■□□□□ 0.24
SEC13-208ENST00000397109 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.57■□□□□ 0.24
SEC13-208ENST00000397109 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.57■□□□□ 0.24
SEC13-208ENST00000397109 C17orf102A2RUQ5 167 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 PARNO95453 639 aaKnown RBP16.57■□□□□ 0.24
SEC13-208ENST00000397109 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 GNAT1P11488 350 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
SEC13-208ENST00000397109 NEK4P51957 841 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 RBL2Q08999 1139 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 GALNT17Q6IS24 598 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms