RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 LRRC31Q6UY01 552 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 LRRC55Q6ZSA7 311 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 POTEFA5A3E0 1075 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 POTEIP0CG38 1075 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 KLHL30Q0D2K2 578 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 POTEGQ6S5H5 508 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 POTEEQ6S8J3 1075 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 CCDC65Q8IXS2 484 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 RASSF4Q9H2L5 321 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 TAL1P17542 331 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 CYP4A11Q02928 519 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 KLHL7Q8IXQ5 586 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 SPAG5Q96R06 1193 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 LRRC27Q9C0I9 530 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 PCDHA1Q9Y5I3 950 aa17.54■□□□□ 0.4
ATP2A3-206ENST00000397043 GUCY2DQ02846 1103 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 KCNMA1Q12791 1236 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 PRR16Q569H4 304 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 SRLQ86TD4 932 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 BAP1Q92560 729 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 HAS1Q92839 578 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 EHD4Q9H223 541 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 ACTN1P12814 892 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 PACSIN1Q9BY11 444 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 ZC3H12CQ9C0D7 883 aaKnown RBP17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 VIPAS39Q9H9C1 493 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 RIC8AQ9NPQ8 531 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
ATP2A3-206ENST00000397043 PDIA5Q14554 519 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 TMEM51Q9NW97 253 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 STIM2Q9P246 746 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 ESYT2A0FGR8 921 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 EDIL3O43854 480 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 ATP1A2P50993 1020 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 CDK17Q00537 523 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 SEMA3FQ13275 785 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 CFAP221Q4G0U5 840 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 KRT12Q99456 494 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 TLR10Q9BXR5 811 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 EPB41L5Q9HCM4 733 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 LUC7LQ9NQ29 371 aaKnown RBP17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 EMILIN3Q9NT22 766 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 NFU1Q9UMS0 254 aa17.52■□□□□ 0.4
ATP2A3-206ENST00000397043 NR2F2P24468 414 aa17.52■□□□□ 0.39
ATP2A3-206ENST00000397043 KLRC1P26715 233 aa17.52■□□□□ 0.39
ATP2A3-206ENST00000397043 TULP2O00295 520 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 HSF2BPO75031 334 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 HLTFQ14527 1009 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 A0A087X0T9 212 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 AGPSO00116 658 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 ZEB2O60315 1214 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 FAM228BP0C875 321 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 NFIAQ12857 509 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 LAMB1P07942 1786 aa17.51■□□□□ 0.39
ATP2A3-206ENST00000397043 ZBTB5O15062 677 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 HLA-DOAP06340 250 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 KLHDC7AQ5VTJ3 777 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 ZNF662Q6ZS27 426 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 SH2D3CQ8N5H7 860 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 USP21Q9UK80 565 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 LAMB2P55268 1798 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 CETN3O15182 167 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 TLR2O60603 784 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 PRPF6O94906 941 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 KRT14P02533 472 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 IL1R1P14778 569 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 CCT5P48643 541 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 NT5C2P49902 561 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 ASIC2Q16515 512 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 TSEN2Q8NCE0 465 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 TAF4BQ92750 862 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 IQCDQ96DY2 449 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 SFI1A8K8P3 1242 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 SERPING1P05155 500 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 HNRNPH3P31942 346 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 AARSP49588 968 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■■■■■ 35.7
ATP2A3-206ENST00000397043 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 PSMD2Q13200 908 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 CEP72Q9P209 647 aa17.5■□□□□ 0.39
ATP2A3-206ENST00000397043 KCNK3O14649 394 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 KCNH2Q12809 1159 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms