RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 GOLGA6L10A6NI86 522 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 PJA2O43164 708 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 KCNQ2O43526 872 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 CNNM4Q6P4Q7 775 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 FAM228AQ86W67 206 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 ZNF622Q969S3 477 aaKnown RBP eCLIP26.39■■□□□ 1.815e-7■■□□□ 13.7
CSNK1E-203ENST00000396832 SH3GLB2Q9NR46 395 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 CACNB1Q02641 598 aaPredicted RBP26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 C12orf60Q5U649 245 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 ARFGAP2Q8N6H7 521 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 IQCDQ96DY2 449 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 GOLPH3Q9H4A6 298 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 TSKSQ9UJT2 592 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 TMED8Q6PL24 325 aaPredicted RBP26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 CALML4Q96GE6 196 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 SCLT1Q96NL6 688 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 HAUS2Q9NVX0 235 aa26.38■■□□□ 1.81
CSNK1E-203ENST00000396832 TMCO5BA8MYB1 307 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 NEK8Q86SG6 692 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 CDK5RAP3Q96JB5 506 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 PIGSQ96S52 555 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 C7orf25Q9BPX7 421 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 FRMPD2Q68DX3 1309 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 TDP2O95551 362 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 DGKHQ86XP1 1220 aa26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.37■■□□□ 1.81
CSNK1E-203ENST00000396832 SLC37A4O43826 429 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 GCFC2P16383 781 aaKnown RBP26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 SV2BQ7L1I2 683 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 KCNK18Q7Z418 384 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 SCN7AQ01118 1682 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 LAMB1P07942 1786 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 GRB10Q13322 594 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 QPCTQ16769 361 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 TBC1D9BQ66K14 1250 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 RNF10Q8N5U6 811 aaKnown RBP26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 SGSM3Q96HU1 749 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 BLOC1S4Q9NUP1 217 aa26.36■■□□□ 1.81
CSNK1E-203ENST00000396832 CCDC189A1A4V9 331 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 GCOM1H8Y6P7 765 aaPredicted RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 MYZAPP0CAP1 466 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 HSPA9P38646 679 aaKnown RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 EIF6P56537 245 aaKnown RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 CDC37Q16543 378 aaPredicted RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 ANKRD20A8PQ5CZ79 823 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 CCDC50Q8IVM0 306 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 TPX2Q9ULW0 747 aaKnown RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 RPS8P62241 208 aaKnown RBP26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 SEMA3FQ13275 785 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 NELFCDQ8IXH7 590 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 COA7Q96BR5 231 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 ZNF652Q9Y2D9 606 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 KIAA1551Q9HCM1 1747 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 PALMO75781 387 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 OR2W6PQ8NHA6 318 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 BAP1Q92560 729 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 PACSIN1Q9BY11 444 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 FGFBP2Q9BYJ0 223 aa26.35■■□□□ 1.81
CSNK1E-203ENST00000396832 TRAPPC3O43617 180 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 TMOD1P28289 359 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 MRPL12P52815 198 aaKnown RBP26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 E2F5Q15329 346 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 MAN2A1Q16706 1144 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 SBK1Q52WX2 424 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 CENPPQ6IPU0 288 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 CLEC10AQ8IUN9 316 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 PLCB1Q9NQ66 1216 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 EZRP15311 586 aaKnown RBP26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 AMPD3Q01432 767 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 SOGA3Q5TF21 947 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 KLHL7Q8IXQ5 586 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 LARP4BQ92615 738 aaKnown RBP26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 SRP68Q9UHB9 627 aaKnown RBP26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 LEMD3Q9Y2U8 911 aa26.34■■□□□ 1.81
CSNK1E-203ENST00000396832 RAD51CO43502 376 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 PRPHP41219 470 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 HLTFQ14527 1009 aaKnown RBP eCLIP26.33■■□□□ 1.817e-7■■■□□ 14.7
CSNK1E-203ENST00000396832 ASTE1Q2TB18 679 aaPredicted RBP26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 SEC16BQ96JE7 1060 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 SLC12A6Q9UHW9 1150 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 HSD17B3P37058 310 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 POLR2FP61218 127 aaKnown RBP26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 EHHADHQ08426 723 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 CALCRLQ16602 461 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 PNMA5Q96PV4 448 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 ZMYND12Q9H0C1 365 aa26.33■■□□□ 1.81
CSNK1E-203ENST00000396832 BACH1O14867 736 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 ATP2C2O75185 946 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 ECM2O94769 699 aaPredicted RBP26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 GNAQP50148 359 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 DDB1Q16531 1140 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 C3orf20Q8ND61 904 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 MAGEC3Q8TD91 643 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 SNX29Q8TEQ0 813 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 DDX12PQ92771 950 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 BCCIPQ9P287 314 aaKnown RBP eCLIP26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 SEC63Q9UGP8 760 aaKnown RBP26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 SRCAPQ6ZRS2 3230 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 PALM3A6NDB9 673 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms