RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 IQCDQ96DY2 449 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 MMRN2Q9H8L6 949 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 ARHGAP20Q9P2F6 1191 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 FRMD3A2A2Y4 597 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 DMTNQ08495 405 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 SLC15A2Q16348 729 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 WHAMMP3Q1A5X7 153 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 NCAPH2Q6IBW4 605 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 NELFCDQ8IXH7 590 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRIM39-205ENST00000396551 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 TBX3O15119 743 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 SASH3O75995 380 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 FKBP3Q00688 224 aaKnown RBP18.36■□□□□ 0.53
TRIM39-205ENST00000396551 MCTP2Q6DN12 878 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 TRAPPC11Q7Z392 1133 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 SCFD1Q8WVM8 642 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 HDAC6Q9UBN7 1215 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 COL4A3BPQ9Y5P4 624 aa18.36■□□□□ 0.53
TRIM39-205ENST00000396551 COL4A5P29400 1685 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 TRAF5O00463 557 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 ENC1O14682 589 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
TRIM39-205ENST00000396551 KRT26Q7Z3Y9 468 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 SUPT20HQ8NEM7 779 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 CYP2W1Q8TAV3 490 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 ACER1Q8TDN7 264 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 BAP1Q92560 729 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 KCTD10Q9H3F6 313 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 DUSP10Q9Y6W6 482 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
TRIM39-205ENST00000396551 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
TRIM39-205ENST00000396551 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
TRIM39-205ENST00000396551 MEIS1O00470 390 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 MSH4O15457 936 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 CIITAP33076 1130 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 HERC5Q9UII4 1024 aaKnown RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC84Q86UT8 332 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 GPIHBP1Q8IV16 184 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 PNKPQ96T60 521 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 ATAD5Q96QE3 1844 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 KIF13BQ9NQT8 1826 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 PITPNM2Q9BZ72 1349 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 KRT86O43790 486 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 RPA1P27694 616 aa18.34■□□□□ 0.53
TRIM39-205ENST00000396551 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-205ENST00000396551 CNTNAP1P78357 1384 aa18.33■□□□□ 0.53
TRIM39-205ENST00000396551 VAV2P52735 878 aa18.33■□□□□ 0.53
TRIM39-205ENST00000396551 GIT2Q14161 759 aa18.33■□□□□ 0.53
TRIM39-205ENST00000396551 CCDC42Q96M95 316 aa18.33■□□□□ 0.53
TRIM39-205ENST00000396551 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.53
TRIM39-205ENST00000396551 CASP5P51878 434 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 GABPB1Q06547 395 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-205ENST00000396551 PABPC4Q13310 644 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRIM39-205ENST00000396551 CCDC40Q4G0X9 1142 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 RRAGAQ7L523 313 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 ZC3H3Q8IXZ2 948 aaKnown RBP18.33■□□□□ 0.52
TRIM39-205ENST00000396551 FAM20AQ96MK3 541 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 CEP63Q96MT8 703 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 GMLQ99445 158 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 ZNF70Q9UC06 446 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-205ENST00000396551 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
TRIM39-205ENST00000396551 CTAGE15A4D2H0 777 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 RAD17O75943 681 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CTAGE8P0CG41 777 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 PAPD7Q5XG87 772 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CTAGE6Q86UF2 777 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CTAGE4Q8IX94 777 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 SYT2Q8N9I0 419 aaPredicted RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 NOA1Q8NC60 698 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 ATP8B1O43520 1251 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 KRT18P05783 430 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CYP3A4P08684 503 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 EIF4A3P38919 411 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 PDXDC1Q6P996 788 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 RAB21Q9UL25 225 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 TMX2Q9Y320 296 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 CCDC151A5D8V7 595 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 IPO7O95373 1038 aaKnown RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 STAT2P52630 851 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 MARSP56192 900 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms