RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 KIF11P52732 1056 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 CALCRLQ16602 461 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 KIAA0825Q8IV33 1275 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 FGFBP2Q9BYJ0 223 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 TRIM31Q9BZY9 425 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 GOLGA6AQ9NYA3 693 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 SALL4Q9UJQ4 1053 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 MYMKA6NI61 221 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 STAT3P40763 770 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP14P54578 494 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 CYP4A11Q02928 519 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 EHHADHQ08426 723 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 MAP9Q49MG5 647 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 MICALL1Q8N3F8 863 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 ARFGEF1Q9Y6D6 1849 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 MYH7BA7E2Y1 1941 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 NPR1P16066 1061 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 PLS1Q14651 629 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 DCAF17Q5H9S7 520 aaPredicted RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 NAA35Q5VZE5 725 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 USP17L6PQ6QN14 398 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 NEK8Q86SG6 692 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 ZSCAN29Q8IWY8 852 aaPredicted RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 ZNF622Q969S3 477 aaKnown RBP eCLIP10.28□□□□□ -0.761e-8■□□□□ 8.5
NDE1-201ENST00000396354 CCDC51Q96ER9 411 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 ZC3H12CQ9C0D7 883 aaKnown RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 IKZF4Q9H2S9 585 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 RIOX1Q9H6W3 641 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 SEPT11Q9NVA2 429 aaKnown RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 ARHGAP20Q9P2F6 1191 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 ADAMTS1Q9UHI8 967 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 AMPD2Q01433 879 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 USH1GQ495M9 461 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 TRAPPC11Q7Z392 1133 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 GOLGA5Q8TBA6 731 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 P2RX7Q99572 595 aaKnown RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 PACSIN1Q9BY11 444 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 NDST4Q9H3R1 872 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 C6orf50Q9HD87 102 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 CAPN11Q9UMQ6 739 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 PCDHA13Q9Y5I0 950 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 COL4A5P29400 1685 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 SFI1A8K8P3 1242 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 E9PMD0 336 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 GUCY2DQ02846 1103 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 PDCLQ13371 301 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 RRP1BQ14684 758 aaKnown RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 ARL6IP4Q66PJ3 421 aaKnown RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 SIAH1Q8IUQ4 282 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 FAM133AQ8N9E0 248 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 GIMAP8Q8ND71 665 aaPredicted RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 JMJD4Q9H9V9 463 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
NDE1-201ENST00000396354 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
NDE1-201ENST00000396354 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 TACC1O75410 805 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 ACTN1P12814 892 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 CRKP46108 304 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.77
NDE1-201ENST00000396354 LRRC31Q6UY01 552 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 MAATS1Q7Z4T9 603 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 MSANTD4Q8NCY6 345 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 DDX12PQ92771 950 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 SERPINB13Q9UIV8 391 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 SMIM23A6NLE4 172 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 PLCG2P16885 1265 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 CCNE1P24864 410 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 EEF1GP26641 437 aaKnown RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 GNAQP50148 359 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 HERC4Q5GLZ8 1057 aaPredicted RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 KRT12Q99456 494 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 G3V3G9 751 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms