RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 ADD3Q9UEY8 706 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 FAM153AQ9UHL3 310 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 STK38LQ9Y2H1 464 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 PKD1L3Q7Z443 1732 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 KRT86O43790 486 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 GNA14O95837 355 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 RASIP1Q5U651 963 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 C8orf74Q6P047 294 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 ABHD8Q96I13 439 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 ZBTB3Q9H5J0 574 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 DDX21Q9NR30 783 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 SAMD15Q9P1V8 674 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 NFU1Q9UMS0 254 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 ZNF148Q9UQR1 794 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 MYH7P12883 1935 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 EIF3FO00303 357 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 UBOX5O94941 541 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 CTDNEP1O95476 244 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 HSPA9P38646 679 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 CACNA2D1P54289 1103 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 COPS2P61201 443 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 GSTM4Q03013 218 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TRIM14Q14142 442 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TMEM53Q6P2H8 277 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 LENG1Q96BZ8 264 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 SPATA16Q9BXB7 569 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 FAM129AQ9BZQ8 928 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 KRT23Q9C075 422 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 CNOT8Q9UFF9 292 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 SNX12Q9UMY4 172 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 PARP4Q9UKK3 1724 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 FAM237AA0A1B0GTK4 181 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 ASLP04424 464 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 PRLRP16471 622 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 GUCY2DQ02846 1103 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 VPS72Q15906 364 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 GALNTL6Q49A17 601 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 FOXP4Q8IVH2 680 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TRMT44Q8IYL2 757 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 STK32AQ8WU08 396 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 BHMTQ93088 406 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 CATSPER2Q96P56 530 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 QTRT2Q9H974 415 aaKnown RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 INIPQ9NRY2 104 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 UBAP1Q9NZ09 502 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 NKX1-2Q9UD57 310 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 ZMYND8Q9ULU4 1186 aaPredicted RBP10.57□□□□□ -0.72
CDRT1-204ENST00000395906 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 LRCH1Q9Y2L9 728 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 BCL9O00512 1426 aa10.57□□□□□ -0.72
CDRT1-204ENST00000395906 SIPA1L3O60292 1781 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 hCG_2014768A0A024R1R8 64 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 HTR3EA5X5Y0 456 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 HOXB7P09629 217 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 VARSP26640 1264 aaKnown RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 CARSP49589 748 aaKnown RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 NEK2P51955 445 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 KRT83P78385 493 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 BEND3Q5T5X7 828 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 TCERG1LQ5VWI1 586 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ANO1Q5XXA6 986 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 CXorf38Q8TB03 319 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ASAP3Q8TDY4 903 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 UCMAQ8WVF2 138 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 EVI5LQ96CN4 794 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 RAB3IPQ96QF0 476 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 CCDC28BQ9BUN5 200 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 TAF6LQ9Y6J9 622 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ERCC5P28715 1186 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 KRT9P35527 623 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 MATR3P43243 847 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 MRPS25P82663 173 aaKnown RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 MAP7Q14244 749 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms