RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 PSMA7O14818 248 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 OPLAHO14841 1288 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 MARCH6O60337 910 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 PRCPP42785 496 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 TBX2Q13207 712 aaPredicted RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 SNX29Q8TEQ0 813 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 NELFBQ8WX92 580 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 LARP4BQ92615 738 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 ERO1AQ96HE7 468 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 BLOC1S4Q9NUP1 217 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 INTS13Q9NVM9 706 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 TMOD4Q9NZQ9 345 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 LIMA1Q9UHB6 759 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 CTNND2Q9UQB3 1225 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 ABCB11O95342 1321 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 WDR46O15213 610 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 BCRP11274 1271 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 ZYXQ15942 572 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 TPD52L1Q16890 204 aaPredicted RBP16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 FILIP1LQ4L180 1135 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 SPECC1LQ69YQ0 1117 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 ARMCX5Q6P1M9 558 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 FOXR2Q6PJQ5 311 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 SMYD4Q8IYR2 804 aaPredicted RBP16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 ANKRD20A12PQ8NF67 263 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 RAD54LQ92698 747 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 C12orf42Q96LP6 360 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 EHMT1Q9H9B1 1298 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-203ENST00000395881 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 POTEMA6NI47 508 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 PSMD2Q13200 908 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 USH1GQ495M9 461 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 OTOP1Q7RTM1 612 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 SAMD3Q8N6K7 520 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 ETNPPLQ8TBG4 499 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 ABHD8Q96I13 439 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 FEZ1Q99689 392 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 ARHGAP39Q9C0H5 1083 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 MGAMO43451 1857 aa16.11■□□□□ 0.17
RTFDC1-203ENST00000395881 CTGFP29279 349 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 ASIC1P78348 528 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 LACTBP83111 547 aaPredicted RBP16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 GHRHRQ02643 423 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 PABPC4Q13310 644 aaKnown RBP eCLIP16.1■□□□□ 0.173e-10■■■■□ 25.4
RTFDC1-203ENST00000395881 ARID5BQ14865 1188 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 HAUS3Q68CZ6 603 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 LENG9Q96B70 501 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 PRIMPOLQ96LW4 560 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 PLIN2Q99541 437 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 P2RX7Q99572 595 aaKnown RBP16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 GDAQ9Y2T3 454 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 TRIM17Q9Y577 477 aa16.1■□□□□ 0.17
RTFDC1-203ENST00000395881 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 FDX1P10109 184 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 OSBPP22059 807 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 PBX1P40424 430 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 USP14P54578 494 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 STX17P56962 302 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 PDE4DQ08499 809 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 MAP3K20Q9NYL2 800 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 CCP110O43303 1012 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 ECM2O94769 699 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 ICAM1P05362 532 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 CCNE1P24864 410 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 SNAP25P60880 206 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 C17orf53Q8N3J3 647 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
RTFDC1-203ENST00000395881 MYMKA6NI61 221 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 TUBB4AP04350 444 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 VCAM1P19320 739 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 EHHADHQ08426 723 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 MCM6Q14566 821 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 TCP11X2Q5H9J9 407 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 TTI2Q6NXR4 508 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
RTFDC1-203ENST00000395881 NUDT12Q9BQG2 462 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms