RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 DGKHQ86XP1 1220 aa18.81■□□□□ 0.6
UBFD1-201ENST00000395878 RPS6KC1Q96S38 1066 aa18.81■□□□□ 0.6
UBFD1-201ENST00000395878 PI4KBQ9UBF8 816 aa18.81■□□□□ 0.6
UBFD1-201ENST00000395878 PCDHA13Q9Y5I0 950 aa18.81■□□□□ 0.6
UBFD1-201ENST00000395878 IFNAR2P48551 515 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ASPHQ12797 758 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 PTPN21Q16825 1174 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ANAPC5Q9UJX4 755 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ATP8A1Q9Y2Q0 1164 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 PNMA6FA0A0J9YX94 578 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 FTCDO95954 541 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 SRGAP2BP0DMP2 458 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 CCND2P30279 289 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ECE1P42892 770 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 MXI1P50539 228 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 SLMAPQ14BN4 828 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 SNCBQ16143 134 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 FAM196AQ6ZSG2 479 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 NPHP4O75161 1426 aaPredicted RBP18.8■□□□□ 0.6
UBFD1-201ENST00000395878 INO80B-WBP1J3KQ70 363 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 MEIS1O00470 390 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 PTPREP23469 700 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 TTC19Q6DKK2 380 aaPredicted RBP18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ARMC9Q7Z3E5 817 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 INO80BQ9C086 356 aaPredicted RBP18.8■□□□□ 0.6
UBFD1-201ENST00000395878 MCF2LO15068 1137 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 MECOMQ03112 1051 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 ARHGEF18Q6ZSZ5 1173 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 PCIF1Q9H4Z3 704 aa18.8■□□□□ 0.6
UBFD1-201ENST00000395878 UBE2TQ9NPD8 197 aaPredicted RBP18.8■□□□□ 0.6
UBFD1-201ENST00000395878 MED7O43513 233 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 KRT1P04264 644 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 SAT1P21673 171 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 IFRD2Q12894 506 aaPredicted RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 CNOT10Q9H9A5 744 aaKnown RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 SYNJ2BP-COX16A0A087WUM0 186 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 GPC4O75487 556 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 ZMYND10O75800 440 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 RESP18Q5W5W9 173 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 DNAJC24Q6P3W2 148 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 WHAMMQ8TF30 809 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 SPTLC3Q9NUV7 552 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 COX16Q9P0S2 106 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 SPDYE16A6NNV3 312 aaPredicted RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 RFC1P35251 1148 aaPredicted RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 DHX9Q08211 1270 aaKnown RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 TTLL11Q8NHH1 800 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 TMED8Q6PL24 325 aaPredicted RBP18.79■□□□□ 0.6
UBFD1-201ENST00000395878 AIFM3Q96NN9 605 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 PARD6BQ9BYG5 372 aa18.79■□□□□ 0.6
UBFD1-201ENST00000395878 TRIM68Q6AZZ1 485 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 FAM160B2Q86V87 743 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 MB21D1Q8N884 522 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 AKT3Q9Y243 479 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
UBFD1-201ENST00000395878 LUC7L3O95232 432 aaKnown RBP18.78■□□□□ 0.6
UBFD1-201ENST00000395878 IFT88Q13099 833 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 KRT31Q15323 416 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 BBS5Q8N3I7 341 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
UBFD1-201ENST00000395878 SAMD9LQ8IVG5 1584 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 MSH2P43246 934 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 NCAPD2Q15021 1401 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 ALS2CLQ60I27 953 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 UGGT1Q9NYU2 1555 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 WDR46O15213 610 aaKnown RBP18.78■□□□□ 0.6
UBFD1-201ENST00000395878 SNX1Q13596 522 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 DBNDD1Q9H9R9 158 aa18.78■□□□□ 0.6
UBFD1-201ENST00000395878 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
UBFD1-201ENST00000395878 MFAP3LO75121 409 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 CPP00450 1065 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 CDK8P49336 464 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 BIRC2Q13490 618 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 KIF22Q14807 665 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 JADE1Q6IE81 842 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 CXCR5P32302 372 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 GRAPQ13588 217 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 MMEL1Q495T6 779 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 GRAPLQ8TC17 118 aaPredicted RBP18.77■□□□□ 0.6
UBFD1-201ENST00000395878 HAUS8Q9BT25 410 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 STK36Q9NRP7 1315 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 TTC36A6NLP5 189 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 GOLGA8SH3BPF8 625 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 OPHN1O60890 802 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 UBE2SQ16763 222 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms