RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CCDC42Q96M95 316 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 MMRN2Q9H8L6 949 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 FAM207AQ9NSI2 230 aaPredicted RBP12.5□□□□□ -0.41
RAE1-203ENST00000395841 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 MED24O75448 989 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 SPA17Q15506 151 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 USH1GQ495M9 461 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 PRR16Q569H4 304 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 UIMC1Q96RL1 719 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 EDEM3Q9BZQ6 932 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 MYH7BA7E2Y1 1941 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 TRAF5O00463 557 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 EPHB6O15197 1021 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 GNA14O95837 355 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 VAV2P52735 878 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 SLC12A3P55017 1021 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 HERC4Q5GLZ8 1057 aaPredicted RBP12.49□□□□□ -0.41
RAE1-203ENST00000395841 PAPD7Q5XG87 772 aaKnown RBP12.49□□□□□ -0.41
RAE1-203ENST00000395841 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
RAE1-203ENST00000395841 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 LACRTQ9GZZ8 138 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 RAB21Q9UL25 225 aa12.49□□□□□ -0.41
RAE1-203ENST00000395841 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 RCCD1A6NED2 376 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 CIITAP33076 1130 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 NEK11Q8NG66 645 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 LENG9Q96B70 501 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 NPHP3-ACAD11A0A0J9YXS1 232 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 TFRCP02786 760 aaKnown RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 KRT18P05783 430 aaKnown RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
RAE1-203ENST00000395841 ARSHQ5FYA8 562 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 SAR1BQ9Y6B6 198 aa12.48□□□□□ -0.41
RAE1-203ENST00000395841 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 ZNF263O14978 683 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 SASH3O75995 380 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 ATP1A1P05023 1023 aaKnown RBP12.47□□□□□ -0.41
RAE1-203ENST00000395841 TUBBP07437 444 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 RPA1P27694 616 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 MARSP56192 900 aaKnown RBP12.47□□□□□ -0.41
RAE1-203ENST00000395841 CYP27A1Q02318 531 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 TEX2Q8IWB9 1127 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
RAE1-203ENST00000395841 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 BAP1Q92560 729 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 KCTD10Q9H3F6 313 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAE1-203ENST00000395841 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 LRRC53A6NM62 1247 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 ENC1O14682 589 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 OPLAHO14841 1288 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 LCA5LO95447 670 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
RAE1-203ENST00000395841 CYP3A4P08684 503 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 TRAF1Q13077 416 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 TERF2Q15554 542 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
RAE1-203ENST00000395841 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms