RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 BLOC1S4Q9NUP1 217 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 FBXO28Q9NVF7 368 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 LAD1O00515 517 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 FGRP09769 529 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 FAM83BQ5T0W9 1011 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 NUP58Q9BVL2 599 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 AMNQ9BXJ7 453 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
SREBF1-205ENST00000395757 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 SHMT1P34896 483 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 FKBP3Q00688 224 aaKnown RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 CASP8Q14790 479 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 GPATCH4Q5T3I0 446 aaKnown RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 NSMFQ6X4W1 530 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 COG1Q8WTW3 980 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ELMO3Q96BJ8 720 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 NUP188Q5SRE5 1749 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ZEB2O60315 1214 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 KCNJ6P48051 423 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 GJB7Q6PEY0 223 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 CAPN11Q9UMQ6 739 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 SMIM23A6NLE4 172 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 CEP104O60308 925 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 NDUFB10O96000 172 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 SRGNP10124 158 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 CT47A1Q5JQC4 288 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ACER1Q8TDN7 264 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 PI4KBQ9UBF8 816 aa15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 CHORDC1Q9UHD1 332 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 REXO2Q9Y3B8 237 aaKnown RBP15.89■□□□□ 0.13
SREBF1-205ENST00000395757 ASIC2Q16515 512 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 WHAMMP3Q1A5X7 153 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 C10orf67Q8IYJ2 551 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 GOPCQ9HD26 462 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 GLI3P10071 1580 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 BMP3P12645 472 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 CKAP4Q07065 602 aaKnown RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 WDR59Q6PJI9 974 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 MYH7P12883 1935 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 ALAS1P13196 640 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 IBSPP21815 317 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 PDE6BP35913 854 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 ARHGAP25P42331 645 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 KCNB1Q14721 858 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 DLGAP5Q15398 846 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 C8orf74Q6P047 294 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 U2AF1L4Q8WU68 220 aaKnown RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-205ENST00000395757 ABCC6O95255 1503 aa15.88■□□□□ 0.13
SREBF1-205ENST00000395757 CCDC151A5D8V7 595 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 H3BQF6 201 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 KCNK3O14649 394 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 GAS7O60861 476 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 MED24O75448 989 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ZC2HC1CQ53FD0 456 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-205ENST00000395757 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 NPR1P16066 1061 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 SLC9A1P19634 815 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 NMT1P30419 496 aaKnown RBP15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 HAUS3Q68CZ6 603 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 PHLDB2Q86SQ0 1253 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 LRRC27Q9C0I9 530 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 MYBP10242 640 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 HNRNPH2P55795 449 aaKnown RBP15.87■□□□□ 0.13
SREBF1-205ENST00000395757 KCNA1Q09470 495 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ODF2Q5BJF6 829 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 NOX5Q96PH1 765 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ANKZF1Q9H8Y5 726 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
SREBF1-205ENST00000395757 GFPT2O94808 682 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
SREBF1-205ENST00000395757 BRD3Q15059 726 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 ARHGAP20Q9P2F6 1191 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 STK17AQ9UEE5 414 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 TRIM49P0CI25 452 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 TRIM49CP0CI26 452 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
SREBF1-205ENST00000395757 SYDE2Q5VT97 1194 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 APOBEC3HQ6NTF7 200 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms