RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MYCLP12524 364 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-203ENST00000395453 ALADP13716 330 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 KIF5BP33176 963 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 KCNJ6P48051 423 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 SP2Q02086 613 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 MYSM1Q5VVJ2 828 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 IL31RAQ8NI17 732 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 PPTC7Q8NI37 304 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 CTAGE1Q96RT6 745 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 MYL10Q9BUA6 226 aa15.64■□□□□ 0.09
SCAF11-203ENST00000395453 FRMPD4Q14CM0 1322 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 CCND2P30279 289 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 MRE11P49959 708 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 GNAQP50148 359 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 CELF3Q5SZQ8 465 aaKnown RBP15.63■□□□□ 0.09
SCAF11-203ENST00000395453 FAM178BQ8IXR5 827 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 DHX37Q8IY37 1157 aaKnown RBP15.63■□□□□ 0.09
SCAF11-203ENST00000395453 CTCFLQ8NI51 663 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-203ENST00000395453 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 ZBED2Q9BTP6 218 aa15.63■□□□□ 0.09
SCAF11-203ENST00000395453 UBE2ZQ9H832 354 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-203ENST00000395453 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 HAS3O00219 553 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 SSTR3P32745 418 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 TIE1P35590 1138 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 MRPS9P82933 396 aaKnown RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 PTGISQ16647 500 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 LEXMQ3ZCV2 418 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 GDF6Q6KF10 455 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 SPRED2Q7Z698 418 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 SGMS1Q86VZ5 419 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 FCHSD1Q86WN1 690 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 SRBD1Q8N5C6 995 aaKnown RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 GDPD5Q8WTR4 605 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 RRP36Q96EU6 259 aaKnown RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 ANO2Q9NQ90 1003 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 NOD1Q9Y239 953 aa15.62■□□□□ 0.09
SCAF11-203ENST00000395453 TRIP12Q14669 1992 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-203ENST00000395453 TET1Q8NFU7 2136 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 LCHNA4D1U4 455 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 PIK3CDO00329 1044 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 STAM2O75886 525 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 PLEKHA8P1O95397 391 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 F2P00734 622 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 CALM1P0DP23 149 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 CALM2P0DP24 149 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 CALM3P0DP25 149 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 PSEN2P49810 448 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 HSDL1Q3SXM5 330 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 TSGA10IPQ3SY00 556 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 CCDC155Q8N6L0 562 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 PIBF1Q8WXW3 757 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
SCAF11-203ENST00000395453 INPP4AQ96PE3 977 aaPredicted RBP15.61■□□□□ 0.09
SCAF11-203ENST00000395453 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 SUGCTQ9HAC7 445 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 BMP2KQ9NSY1 1161 aaPredicted RBP15.61■□□□□ 0.09
SCAF11-203ENST00000395453 GTF2IRD1Q9UHL9 959 aa15.61■□□□□ 0.09
SCAF11-203ENST00000395453 MEIS2O14770 477 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 MAP3K13O43283 966 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 GGPS1O95749 300 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 UBA1P22314 1058 aaKnown RBP15.6■□□□□ 0.09
SCAF11-203ENST00000395453 ICAM3P32942 547 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 WDR5P61964 334 aaKnown RBP15.6■□□□□ 0.09
SCAF11-203ENST00000395453 EXOSC10Q01780 885 aaKnown RBP15.6■□□□□ 0.09
SCAF11-203ENST00000395453 RBL2Q08999 1139 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 FANCBQ8NB91 859 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 CAGE1Q8TC20 777 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
SCAF11-203ENST00000395453 SPATA33Q96N06 139 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 TGS1Q96RS0 853 aaKnown RBP15.6■□□□□ 0.09
SCAF11-203ENST00000395453 RAD9AQ99638 391 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 KATNAL1Q9BW62 490 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 HDAC6Q9UBN7 1215 aa15.6■□□□□ 0.09
SCAF11-203ENST00000395453 COL4A4P53420 1690 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-203ENST00000395453 TANC1Q9C0D5 1861 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 WDFY4Q6ZS81 3184 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 SPATA31C2B4DYI2 1134 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 KCNA5P22460 613 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 CHMP4BP1P59074 171 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 ERVK-21P61565 698 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 NHLH1Q02575 133 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 MFSD10Q14728 455 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 GPNMBQ14956 572 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 KIAA0753Q2KHM9 967 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 RNF20Q5VTR2 975 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 CMTR1Q8N1G2 835 aaKnown RBP15.59■□□□□ 0.09
SCAF11-203ENST00000395453 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-203ENST00000395453 AFAP1L1Q8TED9 768 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 DHX38Q92620 1227 aaKnown RBP15.59■□□□□ 0.09
SCAF11-203ENST00000395453 C16orf70Q9BSU1 422 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms