RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 A0A0U1RQJ8 604 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 NCK2O43639 380 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 FAM83BQ5T0W9 1011 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PDXDC1Q6P996 788 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 MYCT1Q8N699 235 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 CEP63Q96MT8 703 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 ZMYND12Q9H0C1 365 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 RAB17Q9H0T7 212 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 CAPN7Q9Y6W3 813 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PNMA6FA0A0J9YX94 578 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 LRRIQ3A6PVS8 624 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 PALMO75781 387 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 AFPP02771 609 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 HERVK_113P62684 666 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 USH1GQ495M9 461 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 RIN2Q8WYP3 895 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 CHMP2AO43633 222 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 TDP2O95551 362 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 PBX1P40424 430 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 COASYQ13057 564 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 LACRTQ9GZZ8 138 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■■■□□ 18.6
UBE2D3-209ENST00000394804 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 FEZ2Q9UHY8 353 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 TUBGCP6Q96RT7 1819 aa12.79□□□□□ -0.36
UBE2D3-209ENST00000394804 SLC16A2P36021 539 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PPARDQ03181 441 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 FIGNQ5HY92 759 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PBKQ96KB5 322 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 GPR101Q96P66 508 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 SSU72P8A0A1W2PR75 194 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 SMIM22K7EJ46 135 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 TRIM66O15016 1216 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PLS1Q14651 629 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 EFCC1Q9HA90 598 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 NID2Q14112 1375 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 NR1D1P20393 614 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 ABCB4P21439 1286 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 PDCLQ13371 301 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 CLUL1Q15846 466 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 TADA2BQ86TJ2 420 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 UBL4BQ8N7F7 174 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
UBE2D3-209ENST00000394804 MYMKA6NI61 221 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 CALCOCO2Q13137 446 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 KCTD1Q719H9 257 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 MMGT1Q8N4V1 131 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 CTTNBP2NLQ9P2B4 639 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 C5P01031 1676 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 RASA1P20936 1047 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 KLRK1P26718 216 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 PDIA5Q14554 519 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 CCDC25Q86WR0 208 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 GJA10Q969M2 543 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 TEKT1Q969V4 418 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 CCDC17Q96LX7 622 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 DPH5Q9H2P9 285 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 SAMD15Q9P1V8 674 aa12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.36
UBE2D3-209ENST00000394804 EXOC3O60645 756 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 KIF4AO95239 1232 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 FERP16591 822 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 FUT2Q10981 343 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 ALKBH5Q6P6C2 394 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 CROCCP2Q86T23 111 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 CDK17Q00537 523 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 TCP10Q12799 353 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.37
UBE2D3-209ENST00000394804 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 HMGB1P1B2RPK0 211 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms