RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 EDC3Q96F86 508 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 HEXIM2Q96MH2 286 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 DACH2Q96NX9 599 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 GCNAQ96QF7 691 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 YY1AP1Q9H869 796 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 FGFR1OP2Q9NVK5 253 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 TMEM63CQ9P1W3 806 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 NXF1Q9UBU9 619 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 WARS2Q9UGM6 360 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 CDV3Q9UKY7 258 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 RIMS2Q9UQ26 1411 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 MED7O43513 233 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 HSPA4LO95757 839 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 TFAMQ00059 246 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 OCA2Q04671 838 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PPP2R5BQ15173 497 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 MFSD14BQ5SR56 506 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ARHGAP27Q6ZUM4 889 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 KCTD1Q719H9 257 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ZC3H18Q86VM9 953 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PPHLN1Q8NEY8 458 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ATG3Q9NT62 314 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF215Q9UL58 517 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 BCS1LQ9Y276 419 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 EXOC1LA0A1B0GW35 172 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 CTNND1O60716 968 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ZSCAN20P17040 1043 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 UBE3AQ05086 875 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 FAM98CQ17RN3 349 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 RINLQ6ZS11 566 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 UPF3AQ9H1J1 476 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 NOVA2Q9UNW9 492 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 TRPM2O94759 1503 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PNMA6EA0A0J9YXQ4 647 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 EIF4E1BA6NMX2 242 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 TMEM232C9JQI7 657 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 KLRF2D3W0D1 207 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 CREB3O43889 395 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PRPSAP2O60256 369 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 SNX2O60749 519 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 SPAG7O75391 227 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 GSPT1P15170 499 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 GUCY2CP25092 1073 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PDE6BP35913 854 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 PTGDRQ13258 359 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 GPR162Q16538 588 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 SPATA1Q5VX52 437 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 DNAJC24Q6P3W2 148 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 SPICE1Q8N0Z3 855 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 FAF2Q96CS3 445 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 USP28Q96RU2 1077 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 ZBTB18Q99592 522 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 TUBB6Q9BUF5 446 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 SLC8A2Q9UPR5 921 aa6.13□□□□□ -1.43
GAPVD1-206ENST00000394104 WDR64B1ANS9 1081 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 INO80B-WBP1J3KQ70 363 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ZSCAN9O15535 394 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PDHA1P08559 390 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 BTDP43251 543 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CTSWP56202 376 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 APBA1Q02410 837 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PABPC4Q13310 644 aaKnown RBP eCLIP6.12□□□□□ -1.436e-6■■□□□ 11.5
GAPVD1-206ENST00000394104 NNTQ13423 1086 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 KRT26Q7Z3Y9 468 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CATSPER3Q86XQ3 398 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 EFCAB13Q8IY85 973 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CACTINQ8WUQ7 758 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ACCSQ96QU6 501 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 INO80BQ9C086 356 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 GTSE1Q9NYZ3 720 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 URB2Q14146 1524 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 DENND4BO75064 1496 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 NCKAP5LQ9HCH0 1330 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 XPOTO43592 962 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 DNAJC6O75061 913 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CCDC159P0C7I6 412 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SKIP12755 728 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CCND2P30279 289 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 GYG1P46976 350 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 EPHB4P54760 987 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 MKRN3Q13064 507 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SRRM1Q8IYB3 904 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 RETREG2Q8NC44 543 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 WDR48Q8TAF3 677 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 KCNV2Q8TDN2 545 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 RNF139Q8WU17 664 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 NAF1Q96HR8 494 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ABHD8Q96I13 439 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TSC22D3Q99576 134 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TUBGCP2Q9BSJ2 902 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TEX12Q9BXU0 123 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TRIM55Q9BYV6 548 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 AP5M1Q9H0R1 490 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ING2Q9H160 280 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ZSCAN32Q9NX65 697 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 POLIQ9UNA4 740 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms