RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 MAP3K20Q9NYL2 800 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
LAMB1-203ENST00000393560 SLC4A7Q9Y6M7 1214 aa12.43□□□□□ -0.42
LAMB1-203ENST00000393560 GMNCA6NCL1 334 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 EPB41P11171 864 aaKnown RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 GLULP15104 373 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 MZF1P28698 734 aaPredicted RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.424e-8■■□□□ 14.2
LAMB1-203ENST00000393560 CCNI2Q6ZMN8 369 aaPredicted RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 GOLM1Q8NBJ4 401 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 IP6K1Q92551 441 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 P3H4Q92791 437 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 CENPTQ96BT3 561 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 HAUS7Q99871 368 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 MOSPD1Q9UJG1 213 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 COMMD10Q9Y6G5 202 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 TKTP29401 623 aaKnown RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 FANCCQ00597 558 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 IFI16Q16666 785 aaKnown RBP12.42□□□□□ -0.42
LAMB1-203ENST00000393560 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 SLC35F6Q8N357 371 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 CABLES1Q8TDN4 633 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 CGREF1Q99674 301 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 PSTPIP2Q9H939 334 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 STK38LQ9Y2H1 464 aa12.42□□□□□ -0.42
LAMB1-203ENST00000393560 CFAP73A6NFT4 308 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
LAMB1-203ENST00000393560 BNIP1Q12981 228 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 MLKLQ8NB16 471 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 VPS50Q96JG6 964 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 CCDC42Q96M95 316 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 KCNMB3Q9NPA1 279 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 HSF2BPO75031 334 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 APOEP02649 317 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 COL6A2P12110 1019 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 CACNA2D1P54289 1103 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 MTF1Q14872 753 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
LAMB1-203ENST00000393560 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 SAMD14Q8IZD0 417 aaPredicted RBP12.41□□□□□ -0.42
LAMB1-203ENST00000393560 NCSTNQ92542 709 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 FAM192AQ9GZU8 254 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 ADAM22Q9P0K1 906 aa12.41□□□□□ -0.42
LAMB1-203ENST00000393560 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 HIP1RO75146 1068 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 LARGE1O95461 756 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 SEPT2Q15019 361 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 TAOK1Q7L7X3 1001 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 TREML1Q86YW5 311 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 VPS52Q8N1B4 723 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 PLVAPQ9BX97 442 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 SPATA16Q9BXB7 569 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 SLC30A1Q9Y6M5 507 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 A6NJR5 290 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 CCT8L1PA6NM43 557 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 DGKIO75912 1065 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 PRKACBP22694 351 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 CCR3P51677 355 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 AMPD3Q01432 767 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 WASHC5Q12768 1159 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 TMC4Q7Z404 712 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 NECAB1Q8N987 351 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 SCAIQ8N9R8 606 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 DPF2Q92785 391 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 CLK4Q9HAZ1 481 aaKnown RBP12.4□□□□□ -0.42
LAMB1-203ENST00000393560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.4□□□□□ -0.426e-10■■■□□ 17
LAMB1-203ENST00000393560 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
LAMB1-203ENST00000393560 RXRGP48443 463 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 TMED10P49755 219 aaKnown RBP12.39□□□□□ -0.43
LAMB1-203ENST00000393560 E2F2Q14209 437 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 KIF22Q14807 665 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 CCBE1Q6UXH8 406 aaPredicted RBP12.39□□□□□ -0.43
LAMB1-203ENST00000393560 ESYT1Q9BSJ8 1104 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 GPHNQ9NQX3 736 aaPredicted RBP12.39□□□□□ -0.43
LAMB1-203ENST00000393560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
LAMB1-203ENST00000393560 GABBR1Q9UBS5 961 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 CCPG1Q9ULG6 757 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 CRB1P82279 1406 aa12.39□□□□□ -0.43
LAMB1-203ENST00000393560 C1orf167Q5SNV9 1468 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms