RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RPA1P27694 616 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 GJA5P36382 358 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 HERVK_113P62684 666 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 STIM1Q13586 685 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 MTMR1Q13613 665 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 HSP90AA4PQ58FG1 418 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 NIPA1Q7RTP0 329 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 ENOX1Q8TC92 643 aaKnown RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 NSUN6Q8TEA1 469 aaKnown RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 SPATC1LQ9H0A9 340 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 A1CFQ9NQ94 594 aaKnown RBP9.66□□□□□ -0.86
TDP1-203ENST00000393454 CYP39A1Q9NYL5 469 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 DNM3Q9UQ16 869 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 NFE2L3Q9Y4A8 694 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 FRMPD4Q14CM0 1322 aa9.66□□□□□ -0.86
TDP1-203ENST00000393454 GOLGA6L6A8MZA4 724 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 COBLO75128 1261 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 RHOBTB3O94955 611 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 SERPINC1P01008 464 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 KRT18P05783 430 aaKnown RBP9.65□□□□□ -0.86
TDP1-203ENST00000393454 NR3C2P08235 984 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 BCRP11274 1271 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 ATP1A3P13637 1013 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 PPP2R5CQ13362 524 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 CTTNQ14247 550 aaKnown RBP9.65□□□□□ -0.86
TDP1-203ENST00000393454 GPBP1Q86WP2 473 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 RIOX2Q8IUF8 465 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 TPH2Q8IWU9 490 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 NELFBQ8WX92 580 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 DDX12PQ92771 950 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 DYDC2Q96IM9 177 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 RIT2Q99578 217 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
TDP1-203ENST00000393454 UNC45AQ9H3U1 944 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 AGO4Q9HCK5 861 aaKnown RBP9.65□□□□□ -0.86
TDP1-203ENST00000393454 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 RGL1Q9NZL6 768 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 IFNKQ9P0W0 207 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 FBXO40Q9UH90 709 aa9.65□□□□□ -0.86
TDP1-203ENST00000393454 PRCPP42785 496 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 PSMC6P62333 389 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 FANCCQ00597 558 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 PAK1Q13153 545 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 MOGSQ13724 837 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 SPATA1Q5VX52 437 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 GPAT2Q6NUI2 795 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 XRRA1Q6P2D8 792 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 CNNM4Q6P4Q7 775 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 UNC13DQ70J99 1090 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.65□□□□□ -0.87
TDP1-203ENST00000393454 VSIG10LQ86VR7 867 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 TCEAL9Q9UHQ7 104 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 SAMM50Q9Y512 469 aa9.65□□□□□ -0.87
TDP1-203ENST00000393454 PVALEFA0A1B0GWK0 134 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 FCER1AP12319 257 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 FKBP1BP68106 108 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 RAD51AP2Q09MP3 1159 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 SEMA3FQ13275 785 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 MIER3Q7Z3K6 550 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 ADSSL1Q8N142 457 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
TDP1-203ENST00000393454 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 MRFAP1L1Q96HT8 127 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 MED15Q96RN5 788 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 MOV10L1Q9BXT6 1211 aaKnown RBP9.64□□□□□ -0.87
TDP1-203ENST00000393454 XPO4Q9C0E2 1151 aaKnown RBP9.64□□□□□ -0.87
TDP1-203ENST00000393454 HSD3B7Q9H2F3 369 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 TUFT1Q9NNX1 390 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 SLC39A2Q9NP94 309 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
TDP1-203ENST00000393454 RWDD2AQ9UIY3 292 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 PFASO15067 1338 aa9.64□□□□□ -0.87
TDP1-203ENST00000393454 CCL15-CCL14A0A0B4J2E2 113 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CBFA2T2O43439 604 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CNMDO75829 334 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 SLITRK3O94933 977 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CETPP11597 493 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CDC25BP30305 580 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 GTF2A2P52657 109 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 UBASH3AP57075 661 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 STK4Q13043 487 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 ITGB3BPQ13352 177 aaPredicted RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 EPHA7Q15375 998 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CCL15Q16663 113 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 WDR78Q5VTH9 848 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CREBRFQ8IUR6 639 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 PIGOQ8TEQ8 1089 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 HSD17B14Q9BPX1 270 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 ZHX3Q9H4I2 956 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 TBC1D22BQ9NU19 505 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 PNMA3Q9UL41 463 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 A0A0G2JMZ2 1700 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms