RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CARD8Q9Y2G2 431 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 PCDH11XQ9BZA7 1347 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 PCDH11YQ9BZA8 1340 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 CPS1P31327 1500 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ATP9AO75110 1047 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 CARSP49589 748 aaKnown RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ITIH4Q14624 930 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 NCAPHQ15003 741 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 PIGOQ8TEQ8 1089 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ANGPTL2Q9UKU9 493 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 MTUS1Q9ULD2 1270 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 LZTS1Q9Y250 596 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 KLF18A0A0U1RQI7 1052 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ARHGAP10A1A4S6 786 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 PSMD14O00487 310 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 IFIT1P09914 478 aaKnown RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 CYP27A1Q02318 531 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 LACTB2Q53H82 288 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 CCDC62Q6P9F0 684 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 CHST3Q7LGC8 479 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 TSEN2Q8NCE0 465 aaKnown RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 OR2W6PQ8NHA6 318 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 DPH5Q9H2P9 285 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 MMRN2Q9H8L6 949 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 COMMD3-BMI1R4GMX3 469 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 KRT75O95678 551 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 CALB2P22676 271 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 PEX5P50542 639 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 EIF3BP55884 814 aaKnown RBP8.27□□□□□ -1.08
VTI1A-201ENST00000393077 RASSF7Q02833 373 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 MYBPC2Q14324 1141 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 MMGT1Q8N4V1 131 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 RNF14Q9UBS8 474 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 SERTAD1Q9UHV2 236 aa8.27□□□□□ -1.08
VTI1A-201ENST00000393077 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.08
VTI1A-201ENST00000393077 CASQ2O14958 399 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 LCA5LO95447 670 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 HOXB7P09629 217 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 NFKBIAP25963 317 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ADAM9Q13443 819 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 FAM228AQ86W67 206 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 RBBP8NLQ8NC74 664 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 BHMTQ93088 406 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 LENG1Q96BZ8 264 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 BRD8Q9H0E9 1235 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 MCF2LO15068 1137 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 NDUFB5O43674 189 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 EZH2Q15910 746 aaKnown RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 MDM1Q8TC05 714 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 DTX3LQ8TDB6 740 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 EURLQ9NYK6 297 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 E7ENQ6 273 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 BUB1O43683 1085 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ETS2P15036 469 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 CHN1P15882 459 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 S100A1P23297 94 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 CDC37Q16543 378 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-201ENST00000393077 KCTD21Q4G0X4 260 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 FYB2Q5VWT5 728 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 IQCF2Q8IXL9 164 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ZNF280CQ8ND82 737 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 FAM89AQ96GI7 184 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 MAN1B1Q9UKM7 699 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ARL2BPQ9Y2Y0 163 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM131LA2VDJ0 1609 aa8.27□□□□□ -1.09
VTI1A-201ENST00000393077 ZMYM6O95789 1325 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 POTEFA5A3E0 1075 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 ORC4O43929 436 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 KRT13P13646 458 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 GNAQP50148 359 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 COPB1P53618 953 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 LRIG3Q6UXM1 1119 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 DNAJC14Q6Y2X3 702 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 ANO5Q75V66 913 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC34Q8IZ02 419 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 WASF1Q92558 559 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CYTH2Q99418 400 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CCDC77Q9BR77 488 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 RNPEPL1Q9HAU8 725 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CIDEBQ9UHD4 219 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 SNX12Q9UMY4 172 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 KDM1AO60341 852 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CAPN15O75808 1086 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 GFPT2O94808 682 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 MOCS3O95396 460 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms