RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GAS8O95995 478 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 ANTXR2P58335 489 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 KLRC3Q07444 240 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 RNF169Q8NCN4 708 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 KIAA1524Q8TCG1 905 aa18.12■□□□□ 0.49
SCN3B-202ENST00000392770 SLC35F6Q8N357 371 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 PIGOQ8TEQ8 1089 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 TAF6LQ9Y6J9 622 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 GOLGA6CA6NDK9 693 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 SFI1A8K8P3 1242 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 EFCAB8A8MWE9 144 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 GOLGA6DP0CG33 693 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 PRELPP51888 382 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 RASA3Q14644 834 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 MB21D1Q8N884 522 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 RAB17Q9H0T7 212 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 OSBPL5Q9H0X9 879 aaPredicted RBP18.11■□□□□ 0.49
SCN3B-202ENST00000392770 GOLGA6AQ9NYA3 693 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 BANK1Q8NDB2 785 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
SCN3B-202ENST00000392770 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 MTMR1Q13613 665 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 SHC4Q6S5L8 630 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 ACRBPQ8NEB7 543 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 STRIP1Q5VSL9 837 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 NKIRAS1Q9NYS0 192 aa18.11■□□□□ 0.49
SCN3B-202ENST00000392770 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 UBR1Q8IWV7 1749 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 CCDC121Q6ZUS5 278 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 BPIFA3Q9BQP9 254 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 PALM3A6NDB9 673 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 JPH2Q9BR39 696 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 NHEJ1Q9H9Q4 299 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 TRIM49BA6NDI0 452 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 ENC1O14682 589 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 ORC2Q13416 577 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-202ENST00000392770 CCDC89Q8N998 374 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 NDST4Q9H3R1 872 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 SAMD15Q9P1V8 674 aa18.1■□□□□ 0.49
SCN3B-202ENST00000392770 E9PMD0 336 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 KLRK1P26718 216 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 JAK3P52333 1124 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 ARHGAP4P98171 946 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 SARM1Q6SZW1 724 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 ANKRD36BP1Q96IX9 119 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 LACTBP83111 547 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PTK2Q05397 1052 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 MTMR3Q13615 1198 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 BRD3Q15059 726 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PP2D1A8MPX8 630 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 INO80B-WBP1J3KQ70 363 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 IGSF3O75054 1194 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 NSFP46459 744 aaKnown RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 GUCY2FP51841 1108 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 MRPS9P82933 396 aaKnown RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 MXRA7P84157 204 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 APOL6Q9BWW8 343 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 INO80BQ9C086 356 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PPM1FP49593 454 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 C6orf163Q5TEZ5 329 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 ZBTB33Q86T24 672 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 EXOC8Q8IYI6 725 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PANX2Q96RD6 677 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 PHF20Q9BVI0 1012 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 EBAG9O00559 213 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 LRRN2O75325 713 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 ARL1P40616 181 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
SCN3B-202ENST00000392770 CDC42EP5Q6NZY7 148 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 SLC10A4Q96EP9 437 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 SENP2Q9HC62 589 aa18.09■□□□□ 0.49
SCN3B-202ENST00000392770 SIGLEC1Q9BZZ2 1709 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 EHHADHQ08426 723 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.49
SCN3B-202ENST00000392770 KIF1AQ12756 1690 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 TDP2O95551 362 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 ABCD1P33897 745 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 ATP2C1P98194 919 aaPredicted RBP18.08■□□□□ 0.49
SCN3B-202ENST00000392770 KRT81Q14533 505 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 PDXDC2PQ6P474 469 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 ADAT2Q7Z6V5 191 aaKnown RBP18.08■□□□□ 0.49
SCN3B-202ENST00000392770 PARP2Q9UGN5 583 aa18.08■□□□□ 0.49
SCN3B-202ENST00000392770 HERC5Q9UII4 1024 aaKnown RBP18.08■□□□□ 0.49
SCN3B-202ENST00000392770 GFPT2O94808 682 aa18.08■□□□□ 0.48
SCN3B-202ENST00000392770 CCDC117Q8IWD4 279 aaPredicted RBP18.08■□□□□ 0.48
SCN3B-202ENST00000392770 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.48
SCN3B-202ENST00000392770 DYDC2Q96IM9 177 aa18.08■□□□□ 0.48
SCN3B-202ENST00000392770 UBE2TQ9NPD8 197 aaPredicted RBP18.08■□□□□ 0.48
SCN3B-202ENST00000392770 STAT3P40763 770 aa18.08■□□□□ 0.48
SCN3B-202ENST00000392770 OAS2P29728 719 aaKnown RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 PRCPP42785 496 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 ZBED6P86452 979 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms