RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
TRBV4-1-201ENST00000390357 GPR20Q99678 358 aa15.61■□□□□ 0.09
TRBV4-1-201ENST00000390357 PRDM12Q9H4Q4 367 aa15.61■□□□□ 0.09
TRBV4-1-201ENST00000390357 YBX2Q9Y2T7 364 aaKnown RBP15.61■□□□□ 0.09
TRBV4-1-201ENST00000390357 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 RXRAP19793 462 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 HOXC8P31273 242 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 RABGGTBP53611 331 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 RTN1Q16799 776 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 MCTP2Q6DN12 878 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 PPP1R18Q6NYC8 613 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 HERC6Q8IVU3 1022 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 CMTR1Q8N1G2 835 aaKnown RBP15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 CCDC82Q8N4S0 544 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 PPP1R13LQ8WUF5 828 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 SEPT1Q8WYJ6 367 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 GPKOWQ92917 476 aaPredicted RBP eCLIP15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 KCNB2Q92953 911 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 LRRC2Q9BYS8 371 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 RNPEPQ9H4A4 650 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 PCDHA6Q9UN73 950 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 PCDHA8Q9Y5H6 950 aa15.6■□□□□ 0.09
TRBV4-1-201ENST00000390357 TET1Q8NFU7 2136 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 RPLP2P05387 115 aaKnown RBP15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 FGD1P98174 961 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 SEMA3FQ13275 785 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 GPNMBQ14956 572 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 TRIM71Q2Q1W2 868 aaKnown RBP15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 ZNF618Q5T7W0 954 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 JADE2Q9NQC1 790 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 UBIAD1Q9Y5Z9 338 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 NRCAMQ92823 1304 aa15.59■□□□□ 0.09
TRBV4-1-201ENST00000390357 NBNO60934 754 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 REC8O95072 547 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 SMIM10L2AP0DMW4 78 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 SMIM10L2BP0DMW5 78 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 IGFBP4P22692 258 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 MTMR1Q13613 665 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 ATXN2LQ8WWM7 1075 aaKnown RBP15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 RIC8AQ9NPQ8 531 aa15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 V9GY48 417 aaPredicted RBP15.58■□□□□ 0.08
TRBV4-1-201ENST00000390357 TLL1O43897 1013 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 SORBS3O60504 671 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 LGR5O75473 907 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 CA3P07451 260 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 ITGB5P18084 799 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 PSMA5P28066 241 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 HSPA4P34932 840 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 THPOP40225 353 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 NAPAP54920 295 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 ADCK5Q3MIX3 580 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 RAD9AQ99638 391 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 COL25A1Q9BXS0 654 aaPredicted RBP15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 SMARCAD1Q9H4L7 1026 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 BCAS3Q9H6U6 928 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 BARHL2Q9NY43 387 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 ERAP1Q9NZ08 941 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 BRPF3Q9ULD4 1205 aa15.57■□□□□ 0.08
TRBV4-1-201ENST00000390357 KLF18A0A0U1RQI7 1052 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 SMCO2A6NFE2 343 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 TREHO43280 583 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 GTPBP6O43824 516 aaPredicted RBP15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 ATP9AO75110 1047 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 MYOGP15173 224 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 KCNA2P16389 499 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 TCF7P36402 384 aaPredicted RBP15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 ADAM17P78536 824 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 ZNF200P98182 395 aaPredicted RBP15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 TAF2Q6P1X5 1199 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 TRAF7Q6Q0C0 670 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 FAM43BQ6ZT52 329 aaPredicted RBP15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 RPAINQ86UA6 219 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 CCDC12Q8WUD4 166 aaPredicted RBP15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 MXRA8Q9BRK3 442 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 CNTNAP5Q8WYK1 1306 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 DOCK5Q9H7D0 1870 aa15.56■□□□□ 0.08
TRBV4-1-201ENST00000390357 NFASCO94856 1347 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 GOLGA8AA7E2F4 631 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 GOLGA8BA8MQT2 603 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 GJB5O95377 273 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 AMHP03971 560 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 ADCY7P51828 1080 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 FUT2Q10981 343 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 ADGRE1Q14246 886 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms