RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CCL15Q16663 113 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 MED15Q96RN5 788 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 MAGEF1Q9HAY2 307 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 JADE2Q9NQC1 790 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 KDM3AQ9Y4C1 1321 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 ERCC3P19447 782 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 STX17P56962 302 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 FSTL1Q12841 308 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 ERMNQ8TAM6 284 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 NSUN6Q8TEA1 469 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 NT5C3AQ9H0P0 336 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 HSD3B7Q9H2F3 369 aa13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 AGO4Q9HCK5 861 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-203ENST00000389980 ASTN1O14525 1302 aa13.65□□□□□ -0.23
SPTBN1-203ENST00000389980 TRPM7Q96QT4 1865 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 ATP9AO75110 1047 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 RPA1P27694 616 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 HPS3Q969F9 1004 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 PCNTO95613 3336 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 ZNFX1Q9P2E3 1918 aaKnown RBP13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 PDHXO00330 501 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 IKBKBO14920 756 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 DHX15O43143 795 aaKnown RBP13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 RGS20O76081 388 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 PLA2G4BP0C869 781 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 BCRP11274 1271 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 CETPP11597 493 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 CCND2P30279 289 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 GTF2A2P52657 109 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 HUNKP57058 714 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 AMPD3Q01432 767 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 MYL5Q02045 173 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 DYDC2Q96IM9 177 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
SPTBN1-203ENST00000389980 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 ZBTB39O15060 712 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 MYL1P05976 194 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 FCER1AP12319 257 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 ATP1A3P13637 1013 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 WDR78Q5VTH9 848 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 NIPA1Q7RTP0 329 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 DDX12PQ92771 950 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 DACH1Q9UI36 760 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 CTNND2Q9UQB3 1225 aa13.63□□□□□ -0.23
SPTBN1-203ENST00000389980 SLITRK3O94933 977 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 IDEP14735 1019 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 PRCPP42785 496 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 PDE4DQ08499 809 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 KCNB1Q14721 858 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 B3GNT9Q6UX72 402 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 ZSCAN30Q86W11 494 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 RIT2Q99578 217 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 HSD17B14Q9BPX1 270 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 WRAP73Q9P2S5 460 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 SORBS3O60504 671 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 PGK2P07205 417 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 ZNF75DP51815 510 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 GPBP1Q86WP2 473 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 POLR3CQ9BUI4 534 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 PORCNQ9H237 461 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 EXOC1Q9NV70 894 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
SPTBN1-203ENST00000389980 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms