RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NTRK1P04629 796 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 MVKQ03426 396 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 SNX17Q15036 470 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 DDB1Q16531 1140 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 CYP4F22Q6NT55 531 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 HHIPL2Q6UWX4 724 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 PLCD4Q9BRC7 762 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 SPTLC3Q9NUV7 552 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 SRPK3Q9UPE1 567 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
RNU6-40P-201ENST00000384254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 HGSO14964 777 aaPredicted RBP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 HPXP02790 462 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 SLC6A11P48066 632 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 EPHB1P54762 984 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 SESN3P58005 492 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 MTMR1Q13613 665 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 HSP90AB2PQ58FF8 381 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 HABP4Q5JVS0 413 aaKnown RBP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 CNTD1Q8N815 330 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 NETO2Q8NC67 525 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 UHMK1Q8TAS1 419 aaKnown RBP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 COG1Q8WTW3 980 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 MYLIPQ8WY64 445 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 SEC14L1Q92503 715 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 CRTAC1Q9NQ79 661 aa7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 DBR1Q9UK59 544 aaKnown RBP7.29□□□□□ -1.24
RNU6-40P-201ENST00000384254 SCDO00767 359 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 KCNK3O14649 394 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 MED26O95402 600 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 AMY2AP04746 511 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 MSL3P1P0C860 447 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 AMY2BP19961 511 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 EMC4Q5J8M3 183 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 NOL8Q76FK4 1167 aaKnown RBP7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 WFDC3Q8IUB2 231 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 TRIM48Q8IWZ4 208 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 KIAA1958Q8N8K9 716 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 SLC5A5Q92911 643 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 ASPSCR1Q9BZE9 553 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 SMOC1Q9H4F8 434 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 TOMM22Q9NS69 142 aa7.28□□□□□ -1.24
RNU6-40P-201ENST00000384254 MAN2B1O00754 1011 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 PSPNO60542 156 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 PARNO95453 639 aaKnown RBP7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 GLI4P10075 376 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 PNLIPP16233 465 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 GJA4P35212 333 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 KIF11P52732 1056 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 TTF1Q15361 905 aaPredicted RBP7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 SYDE2Q5VT97 1194 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 KCTD1Q719H9 257 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 PEX11GQ96HA9 241 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 CD244Q9BZW8 370 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 C19orf44Q9H6X5 657 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 ACSS2Q9NR19 701 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 CHPF2Q9P2E5 772 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 MYOTQ9UBF9 498 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 PCDHB4Q9Y5E5 795 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 SPO11Q9Y5K1 396 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 WASHC2AQ641Q2 1341 aa7.27□□□□□ -1.25
RNU6-40P-201ENST00000384254 CLASP2O75122 1294 aaKnown RBP7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 PRKD3O94806 890 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 LSP1P33241 339 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 ERVFC1P60507 584 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 KIR3DS1Q14943 382 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 CCDC181Q5TID7 509 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 NLRX1Q86UT6 975 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZBTB46Q86UZ6 589 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 AHCYL2Q96HN2 611 aaKnown RBP7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 MENTQ9BUN1 341 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 RC3H2Q9HBD1 1191 aaKnown RBP7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 KCNH7Q9NS40 1196 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 H2AFY2Q9P0M6 372 aaPredicted RBP7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 FBLN5Q9UBX5 448 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZNF652Q9Y2D9 606 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 EID1Q9Y6B2 187 aa7.26□□□□□ -1.25
RNU6-40P-201ENST00000384254 TCRBV5S4A2TA0A5A2 114 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 NOTOA8MTQ0 251 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 SLC27A2O14975 620 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 CYBBP04839 570 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 CYP17A1P05093 508 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 RNASE1P07998 156 aaKnown RBP7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 SLC9A1P19634 815 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 TRHRP34981 398 aaPredicted RBP7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 AFMP43652 599 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 NEK2P51955 445 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 TMEM132BQ14DG7 1078 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 BROXQ5VW32 411 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 CPZQ66K79 652 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms