RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SDE2Q6IQ49 451 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 RPTNQ6XPR3 784 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 C16orf59Q7L2K0 433 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 KIAA0907Q7Z7F0 614 aaPredicted RBP4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 SP8Q8IXZ3 490 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 TSPAN17Q96FV3 270 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 SLKQ9H2G2 1235 aaPredicted RBP4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 KANSL2Q9H9L4 492 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 SLC52A2Q9HAB3 445 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 INTS7Q9NVH2 962 aaKnown RBP4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 SIRT5Q9NXA8 310 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 KLHL14Q9P2G3 628 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 CNOT11Q9UKZ1 510 aaKnown RBP4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 TRAF6Q9Y4K3 522 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 IRAK3Q9Y616 596 aa4.05□□□□□ -1.76
RNU6-48P-201ENST00000384161 N4BP3O15049 544 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 CRTAMO95727 393 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 ASLP04424 464 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 FPR2P25090 351 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 CANXP27824 592 aaKnown RBP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 FLT3P36888 993 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 ZXDAP98168 799 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 RTP5Q14D33 572 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 TARBP2Q15633 366 aaKnown RBP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 EMC4Q5J8M3 183 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 ZFYVE27Q5T4F4 411 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 NLRP10Q86W26 655 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 ZC3H7AQ8IWR0 971 aaKnown RBP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 TRIM48Q8IWZ4 208 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 SLC7A14Q8TBB6 771 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 PHOSPHO1Q8TCT1 267 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 FBXW5Q969U6 566 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 CDIP1Q9H305 208 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 CNTD2Q9H8S5 307 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 SLC6A20Q9NP91 592 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 NGRNQ9NPE2 291 aaKnown RBP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 MAGEC2Q9UBF1 373 aaPredicted RBP4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 PCDHA8Q9Y5H6 950 aa4.04□□□□□ -1.76
RNU6-48P-201ENST00000384161 PPP1R12AO14974 1030 aaPredicted RBP4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 RAPGEF3O95398 923 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 GNAT1P11488 350 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 VIPR1P32241 457 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 IGFALSP35858 605 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 ST5P78524 1137 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 SRSF3P84103 164 aaKnown RBP4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PRR5P85299 388 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PABPC4Q13310 644 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PLEKHN1Q494U1 663 aaPredicted RBP4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 STEAP3Q658P3 488 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 OTOP3Q7RTS5 596 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 BRAPQ7Z569 592 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 NLGN4XQ8N0W4 816 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 NLGN1Q8N2Q7 840 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 LINC01356Q8N9X3 169 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PCDH19Q8TAB3 1148 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 NINJ1Q92982 152 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 BDH2Q9BUT1 245 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 RNF38Q9H0F5 515 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 SMOC1Q9H4F8 434 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 IPPKQ9H8X2 491 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PCDH18Q9HCL0 1135 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 TRIM39Q9HCM9 518 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 FBXL7Q9UJT9 491 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 ZNF652Q9Y2D9 606 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 PCDHA9Q9Y5H5 950 aa4.03□□□□□ -1.76
RNU6-48P-201ENST00000384161 CADPSQ9ULU8 1353 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 IRS2Q9Y4H2 1338 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 TCRBV16S1A1N1A0A5B0 115 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 SGSM2O43147 1006 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 TADA3O75528 432 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 NCAM1P13591 858 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 PFKLP17858 780 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 SDHBP21912 280 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 GPR19Q15760 415 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 CRY1Q16526 586 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 HABP4Q5JVS0 413 aaKnown RBP4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 EP400NLQ6ZTU2 488 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 UBE2R2Q712K3 238 aaPredicted RBP4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 TMC6Q7Z403 805 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 MILR1Q7Z6M3 343 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 FAM129CQ86XR2 697 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 CPA5Q8WXQ8 436 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 SCLYQ96I15 445 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 CLUHP3Q96NS8 147 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 KCNJ15Q99712 375 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 JAM3Q9BX67 310 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 CELF4Q9BZC1 486 aaKnown RBP4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 PDGFDQ9GZP0 370 aaPredicted RBP4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 CATSPERZQ9NTU4 200 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 FBLN5Q9UBX5 448 aa4.02□□□□□ -1.77
RNU6-48P-201ENST00000384161 SHROOM4Q9ULL8 1493 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 MATN3O15232 486 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 OPA1O60313 960 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 SRGAP2CP0DJJ0 459 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 LACTBP83111 547 aaPredicted RBP4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 ARHGAP44Q17R89 818 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 NIM1KQ8IY84 436 aa4.01□□□□□ -1.77
RNU6-48P-201ENST00000384161 AHI1Q8N157 1196 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms