RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 SLC39A2Q9NP94 309 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 DAAM1Q9Y4D1 1078 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 LMNB1P20700 586 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 PDIA3P30101 505 aaKnown RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 RABL6Q3YEC7 729 aaPredicted RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 GOLGA8QA0A0J9YX86 632 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GOLGA8OA6NCC3 632 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GOLGA8NF8WBI6 632 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GAS7O60861 476 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 ZMYND10O75800 440 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 MX2P20592 715 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 KCNQ4P56696 695 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 FAM26FQ5R3K3 315 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 N4BP2L2Q92802 583 aaPredicted RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 SCYL1Q96KG9 808 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GUCY2CP25092 1073 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GOLGA8FQ08AF8 430 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 GOLGA8DPQ0D2H9 430 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 CXorf38Q8TB03 319 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
SNPH-201ENST00000381867 MAGOHBQ96A72 148 aaKnown RBP15.18■□□□□ 0.02
SNPH-201ENST00000381867 KIF1AQ12756 1690 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 WDR19Q8NEZ3 1342 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 TTC4O95801 387 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 ASPHQ12797 758 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 SIRT2Q8IXJ6 389 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 LRRC43Q8N309 656 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 PGRMC1O00264 195 aaKnown RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 ZKSCAN8Q15776 578 aaPredicted RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 MMEL1Q495T6 779 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 CMTR1Q8N1G2 835 aaKnown RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 TUBB6Q9BUF5 446 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 INHBAP08476 426 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 SKIP12755 728 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 ALAS1P13196 640 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 LIFRP42702 1097 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 RCN2Q14257 317 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 CASP8Q14790 479 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 ARHGEF16Q5VV41 709 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 CDKL2Q92772 493 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 SPDL1Q96EA4 605 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
SNPH-201ENST00000381867 OSBPP22059 807 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 MECOMQ03112 1051 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 FAM160B2Q86V87 743 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 ST7Q9NRC1 585 aa15.17■□□□□ 0.02
SNPH-201ENST00000381867 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 HNRNPH2P55795 449 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 YWHAGP61981 247 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNPH-201ENST00000381867 BIRC2Q13490 618 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 FAM133BQ5BKY9 247 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 FBXO38Q6PIJ6 1188 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 TRIM50Q86XT4 487 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 RNF169Q8NCN4 708 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 PNMA6AP0CW24 399 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 RCAN1P53805 252 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 KSR1Q8IVT5 923 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 METTL13Q8N6R0 699 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 NR1D1P20393 614 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 ESRRGP62508 458 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 PTGDRQ13258 359 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 SF3B3Q15393 1217 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 CACYBPQ9HB71 228 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 GCFC2P16383 781 aaKnown RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 TERF2Q15554 542 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 DACT3Q96B18 629 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 DHTKD1Q96HY7 919 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
SNPH-201ENST00000381867 BAG5Q9UL15 447 aa15.16■□□□□ 0.02
SNPH-201ENST00000381867 MAP3K7O43318 606 aa15.15■□□□□ 0.02
SNPH-201ENST00000381867 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
SNPH-201ENST00000381867 CYP21A2P08686 494 aa15.15■□□□□ 0.02
SNPH-201ENST00000381867 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
SNPH-201ENST00000381867 ZNF34Q8IZ26 560 aa15.15■□□□□ 0.02
SNPH-201ENST00000381867 RIOK1Q9BRS2 568 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms