RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SCG3Q8WXD2 468 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SEPT8Q92599 483 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 VCPKMTQ9H867 229 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PDE11AQ9HCR9 933 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SORCS3Q9UPU3 1222 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 FAM169AQ9Y6X4 670 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KRT15P19012 456 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 UBXN1Q04323 297 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KSR2Q6VAB6 950 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NSMFQ6X4W1 530 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PLEKHF1Q96S99 279 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PAGR1Q9BTK6 254 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 MPP6Q9NZW5 540 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 BLOC1S6Q9UL45 172 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ADGRA2Q96PE1 1338 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 SMIM31A0A1B0GVY4 71 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KLHL41O60662 606 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 HAND2P61296 217 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PSMC1P62191 440 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 AP2B1P63010 937 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 LRRC63Q05C16 580 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 FKBP9P1Q75LS8 142 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RCOR1Q9UKL0 485 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ARHGAP26Q9UNA1 814 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 A0A1W2PQJ5 194 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 FAM187AA6NFU0 413 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 LONP1P36776 959 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 BYSLQ13895 437 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ANKRD20A3Q5VUR7 823 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ZBTB33Q86T24 672 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 CYTH2Q99418 400 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 USP6P35125 1406 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PTPDC1A2A3K4 754 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RFC1P35251 1148 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 BASP1P80723 227 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RPS6KA1Q15418 735 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 FHOD1Q9Y613 1164 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 COMMD3-BMI1R4GMX3 469 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PTPRUQ92729 1446 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 PALM3A6NDB9 673 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 CALB2P22676 271 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 S100A1P23297 94 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NAA20P61599 178 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 AP1B1Q10567 949 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ITGA9Q13797 1035 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 VSIG1Q86XK7 387 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RASSF5Q8WWW0 418 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 IP6K1Q92551 441 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 RAB21Q9UL25 225 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 CAPN15O75808 1086 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 HIBADHP31937 336 aaKnown RBP5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KMT5BQ4FZB7 885 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 NEK9Q8TD19 979 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 JADE3Q92613 823 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 BRIP1Q9BX63 1249 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 ATG3Q9NT62 314 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 USP16Q9Y5T5 823 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 KDM3BQ7LBC6 1761 aa5.28□□□□□ -1.56
PTPRD-203ENST00000381196 HGSO14964 777 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-203ENST00000381196 NEK2P51955 445 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 CCDC93Q567U6 631 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ATG16L1Q676U5 607 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 FBXL16Q8N461 479 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 GSDMBQ8TAX9 411 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 SNX29Q8TEQ0 813 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 SCFD1Q8WVM8 642 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 BRF1Q92994 677 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 CAVIN3Q969G5 261 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 VPS37BQ9H9H4 285 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 PKD2L1Q9P0L9 805 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 LRCH1Q9Y2L9 728 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ADCY9O60503 1353 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 MED23Q9ULK4 1368 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 TMEM94Q12767 1356 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 PRR23AA6NEV1 266 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ASAP2O43150 1006 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ARL1P40616 181 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ZBED6P86452 979 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 MAP3K10Q02779 954 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 SLC9C2Q5TAH2 1124 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 GRAMD4Q6IC98 578 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ZC3H18Q86VM9 953 aaKnown RBP5.27□□□□□ -1.57
PTPRD-203ENST00000381196 VPS52Q8N1B4 723 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ZNF398Q8TD17 642 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 ARL2BPQ9Y2Y0 163 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 FAM13AO94988 1023 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 BCRP11274 1271 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 HK2P52789 917 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 TFAP4Q01664 338 aa5.27□□□□□ -1.57
PTPRD-203ENST00000381196 RARS2Q5T160 578 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms