RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 NPY5RQ15761 445 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 PLCB1Q9NQ66 1216 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 KBTBD4Q9NVX7 518 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 NWD2Q9ULI1 1742 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 A0A087X0T9 212 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 PGRMC1O00264 195 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 DIAPH2O60879 1101 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 SERPING1P05155 500 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 FAM228BP0C875 321 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 FLT3P36888 993 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 HSPA9P38646 679 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 CUL1Q13616 776 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 TNFRSF25Q93038 417 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 IQCDQ96DY2 449 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 KIF9Q9HAQ2 790 aa12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 INTS9Q9NV88 658 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-202ENST00000381160 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 AP1ARQ63HQ0 302 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 ISCUQ9H1K1 167 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 TFAP4Q01664 338 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 KIF2BQ8N4N8 673 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 KIAA0895Q8NCT3 520 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 TRIM51Q9BSJ1 452 aa12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 CPSF2Q9P2I0 782 aaKnown RBP12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 NOC2LQ9Y3T9 749 aaKnown RBP12.21□□□□□ -0.45
NPC1L1-202ENST00000381160 MYL1P05976 194 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 CHN1P15882 459 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 TNFRSF8P28908 595 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 PPP1R2P41236 205 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 PLTPP55058 493 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 ELF3P78545 371 aaPredicted RBP12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 NFAT5O94916 1531 aa12.21□□□□□ -0.46
NPC1L1-202ENST00000381160 PCDH11XQ9BZA7 1347 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 PCDH11YQ9BZA8 1340 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 CCT8L1PA6NM43 557 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ANP32DO95626 131 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 DCAF17Q5H9S7 520 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 DENND2CQ68D51 928 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ZNF512BQ96KM6 892 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 SIK3Q9Y2K2 1263 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 GRID2IPA4D2P6 1211 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ITGA4P13612 1032 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 COPB2P35606 906 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 TMEM266Q2M3C6 531 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 CD302Q8IX05 232 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 FMO2Q99518 471 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 KCNK9Q9NPC2 374 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 PNPLA7Q6ZV29 1317 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 RAD21O60216 631 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 MYBL1P10243 752 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ABCB4P21439 1286 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 CCNHP51946 323 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 LRRC14Q15048 493 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 NAB2Q15742 525 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 WLSQ5T9L3 541 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 LRIG3Q6UXM1 1119 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 NEUROG2Q9H2A3 272 aa12.2□□□□□ -0.46
NPC1L1-202ENST00000381160 NONOQ15233 471 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 C6orf89Q6UWU4 347 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 ANKRD42Q8N9B4 389 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 KLHL29Q96CT2 875 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 CCSER1Q9C0I3 900 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 CAND2O75155 1236 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 ADCY1Q08828 1119 aa12.19□□□□□ -0.46
NPC1L1-202ENST00000381160 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms