RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 SLC1A4P43007 532 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 MMGT1Q8N4V1 131 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 VCPKMTQ9H867 229 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 FSBPO95073 299 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 IL1R1P14778 569 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 ADSSL1Q8N142 457 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 MIEF2Q96C03 454 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 ATP6V1G3Q96LB4 118 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 ARHGAP20Q9P2F6 1191 aa15.24■□□□□ 0.03
SDC1-202ENST00000381150 CCDC194A0A1B0GVG4 234 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 USP17L4A6NCW7 530 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 LRRC53A6NM62 1247 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 GCKP35557 465 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 TRAPPC10P48553 1259 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 QPCTQ16769 361 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 PDXDC2PQ6P474 469 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 USP17L1Q7RTZ2 530 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 ADAT2Q7Z6V5 191 aaKnown RBP15.23■□□□□ 0.03
SDC1-202ENST00000381150 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 SELENOSQ9BQE4 189 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 A0A1B0GUA9 196 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 CYTH3O43739 400 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 KIF1CO43896 1103 aaKnown RBP15.23■□□□□ 0.03
SDC1-202ENST00000381150 EEF1GP26641 437 aaKnown RBP15.23■□□□□ 0.03
SDC1-202ENST00000381150 GRM4Q14833 912 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 ZNF804AQ7Z570 1209 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 MDM1Q8TC05 714 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 TAF4BQ92750 862 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 FAM205AQ6ZU69 1335 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 KCNK3O14649 394 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 PALMO75781 387 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 KIF5BP33176 963 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 GSTO1P78417 241 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 STK4Q13043 487 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 CACNA2D3Q8IZS8 1091 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 TPX2Q9ULW0 747 aaKnown RBP15.23■□□□□ 0.03
SDC1-202ENST00000381150 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
SDC1-202ENST00000381150 CEP104O60308 925 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 RASA1P20936 1047 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 SMTNP53814 917 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 KRT71Q3SY84 523 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 FAM133BQ5BKY9 247 aaKnown RBP15.22■□□□□ 0.03
SDC1-202ENST00000381150 CASKIN2Q8WXE0 1202 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 DPH5Q9H2P9 285 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 BAG3O95817 575 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 SRGNP10124 158 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 FECHP22830 423 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 INF2Q27J81 1249 aa15.22■□□□□ 0.03
SDC1-202ENST00000381150 TBC1D1Q86TI0 1168 aaPredicted RBP15.22■□□□□ 0.03
SDC1-202ENST00000381150 GMNCA6NCL1 334 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 DNM1LO00429 736 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 FAM107AO95990 144 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 SKOR1P84550 965 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
SDC1-202ENST00000381150 NUP58Q9BVL2 599 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 TRIM6Q9C030 488 aaPredicted RBP15.21■□□□□ 0.03
SDC1-202ENST00000381150 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
SDC1-202ENST00000381150 LRRC41Q15345 812 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 KDM7AQ6ZMT4 941 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 MICAL1Q8TDZ2 1067 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.03
SDC1-202ENST00000381150 DISC1Q9NRI5 854 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 POLLQ9UGP5 575 aa15.21■□□□□ 0.03
SDC1-202ENST00000381150 SERPINB2P05120 415 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 IFNAR2P48551 515 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 ACCSLQ4AC99 568 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 BLIDQ8IZY5 108 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 FUKQ8N0W3 1084 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 FAM163AQ96GL9 167 aaPredicted RBP15.21■□□□□ 0.02
SDC1-202ENST00000381150 TMEM47Q9BQJ4 181 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 L3MBTL1Q9Y468 752 aa15.21■□□□□ 0.02
SDC1-202ENST00000381150 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 RAD51CO43502 376 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 LDHCP07864 332 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 MYBL1P10243 752 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 RHBDL3P58872 404 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 MAGOHP61326 146 aaKnown RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 KSR1Q8IVT5 923 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 P2RX5Q93086 422 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 TLR10Q9BXR5 811 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms