RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ATP6V1DQ9Y5K8 247 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 NFASCO94856 1347 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 NKRFO15226 690 aaKnown RBP eCLIP21.25■□□□□ 0.99
SMN2-202ENST00000380742 DUSP11O75319 330 aaKnown RBP21.25■□□□□ 0.99
SMN2-202ENST00000380742 OR52Z1P0C646 297 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 ATP2C1P98194 919 aaPredicted RBP21.25■□□□□ 0.99
SMN2-202ENST00000380742 NEDD9Q14511 834 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 CELF3Q5SZQ8 465 aaKnown RBP21.25■□□□□ 0.99
SMN2-202ENST00000380742 CYFIP1Q7L576 1253 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 POLR3EQ9NVU0 708 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 TELO2Q9Y4R8 837 aa21.25■□□□□ 0.99
SMN2-202ENST00000380742 PSMD10O75832 226 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 FARP2O94887 1054 aaPredicted RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 BAG4O95429 457 aaKnown RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 GH1P01241 217 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 NASPP49321 788 aaPredicted RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 LRCH2Q5VUJ6 765 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 LHX8Q68G74 356 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 ATL3Q6DD88 541 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 DHX37Q8IY37 1157 aaKnown RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 SLFN12Q8IYM2 578 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 GIMAP8Q8ND71 665 aaPredicted RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 RIT2Q99578 217 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 PAK6Q9NQU5 681 aaPredicted RBP21.24■□□□□ 0.99
SMN2-202ENST00000380742 TBC1D22BQ9NU19 505 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 BRCA2P51587 3418 aa21.24■□□□□ 0.99
SMN2-202ENST00000380742 DDX39AO00148 427 aaKnown RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 LAD1O00515 517 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 DYNC1LI2O43237 492 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 MARCH6O60337 910 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 RARBP10826 455 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 TXKP42681 527 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 IRX5P78411 483 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 METTL7BQ6UX53 244 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 TLK2Q86UE8 772 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 TNPO1Q92973 898 aaKnown RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 SDF4Q9BRK5 362 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 RNF208Q9H0X6 261 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 MLXIPQ9HAP2 919 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 CEP131Q9UPN4 1083 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 Q9Y3F1 56 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 GAS7O60861 476 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 BMP15O95972 392 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 SLC39A14Q15043 492 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 IL17AQ16552 155 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 COL13A1Q5TAT6 717 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 B3GNT9Q6UX72 402 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 LINC00301Q8NCQ3 95 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 OR6J1Q8NGC5 347 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 EMID1Q96A84 441 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 TEKT3Q9BXF9 490 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 TTC12Q9H892 705 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 JPH1Q9HDC5 661 aaPredicted RBP21.23■□□□□ 0.99
SMN2-202ENST00000380742 SLC9A2Q9UBY0 812 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 VAV3Q9UKW4 847 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 CFAP45Q9UL16 551 aa21.23■□□□□ 0.99
SMN2-202ENST00000380742 SYNRGQ9UMZ2 1314 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 MSCO60682 206 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 CCNE2O96020 404 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 PRPHP41219 470 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 KRT85P78386 507 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 SP4Q02446 784 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 LAMC2Q13753 1193 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 HSDL1Q3SXM5 330 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 UPF3AQ9H1J1 476 aaKnown RBP21.22■□□□□ 0.99
SMN2-202ENST00000380742 UNC45AQ9H3U1 944 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 PCDHA12Q9UN75 941 aa21.22■□□□□ 0.99
SMN2-202ENST00000380742 MYH9P35579 1960 aaKnown RBP21.21■□□□□ 0.99
SMN2-202ENST00000380742 CTAGE5O15320 804 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 YEATS4O95619 227 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 PGK1P00558 417 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 NCLP19338 710 aaKnown RBP21.21■□□□□ 0.99
SMN2-202ENST00000380742 MARCKSP29966 332 aaPredicted RBP21.21■□□□□ 0.99
SMN2-202ENST00000380742 GJA9P57773 515 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 SPIRE1Q08AE8 756 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 STK38Q15208 465 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 AFG1LQ8WV93 481 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 SPATA33Q96N06 139 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 DEFB118Q96PH6 123 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 AP5M1Q9H0R1 490 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 XPNPEP3Q9NQH7 507 aa21.21■□□□□ 0.99
SMN2-202ENST00000380742 MYADML2A6NDP7 307 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 ADAMTS4O75173 837 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 TECP42680 631 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 NKX3-2P78367 333 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 PPP2R5CQ13362 524 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 ARL6IP4Q66PJ3 421 aaKnown RBP21.2■□□□□ 0.98
SMN2-202ENST00000380742 GPR20Q99678 358 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 RCOR1Q9UKL0 485 aa21.2■□□□□ 0.98
SMN2-202ENST00000380742 MORC2Q9Y6X9 1032 aaPredicted RBP21.2■□□□□ 0.98
SMN2-202ENST00000380742 GSTTP1A0A1W2PQM5 241 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 EML1O00423 815 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 SPTLC2O15270 562 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 CHMP2AO43633 222 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 FXR2P51116 673 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMN2-202ENST00000380742 ACTR2P61160 394 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 BEX3Q00994 111 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 KRT76Q01546 638 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 GRIN1Q05586 938 aa21.19■□□□□ 0.98
SMN2-202ENST00000380742 ZNF746Q6NUN9 644 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms