RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SYNJ2BP-COX16A0A087WUM0 186 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 H7C1W4 665 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 IFRD2Q12894 506 aaPredicted RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 TRIM68Q6AZZ1 485 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 FAM149B1Q96BN6 582 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SPTLC3Q9NUV7 552 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 COX16Q9P0S2 106 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 KDM5CP41229 1560 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 CXCR5P32302 372 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 ARHGEF18Q6ZSZ5 1173 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 DYNLL2Q96FJ2 89 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 STRBPQ96SI9 672 aaKnown RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 ANAPC5Q9UJX4 755 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
COL2A1-202ENST00000380518 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 ECE1P42892 770 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 CCNA1P78396 465 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 C2orf54Q08AI8 447 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 SLMAPQ14BN4 828 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 ARMC9Q7Z3E5 817 aa17.39■□□□□ 0.37
COL2A1-202ENST00000380518 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 WDR46O15213 610 aaKnown RBP17.38■□□□□ 0.37
COL2A1-202ENST00000380518 KRT3P12035 628 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
COL2A1-202ENST00000380518 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 UBE2TQ9NPD8 197 aaPredicted RBP17.38■□□□□ 0.37
COL2A1-202ENST00000380518 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 ROBO2Q9HCK4 1378 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 SNCBQ16143 134 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 DNAJC24Q6P3W2 148 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 KSR1Q8IVT5 923 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 CCHCR1Q8TD31 782 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 GOLGA8CPA6NN73 597 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 MCF2LO15068 1137 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 CYP27A1Q02318 531 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 WHAMMQ8TF30 809 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.38■□□□□ 0.37
COL2A1-202ENST00000380518 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 MECOMQ03112 1051 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 BIRC2Q13490 618 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 KRT31Q15323 416 aa17.38■□□□□ 0.37
COL2A1-202ENST00000380518 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 TTC36A6NLP5 189 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
COL2A1-202ENST00000380518 SNX1Q13596 522 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 ALCAMQ13740 583 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 DIXDC1Q155Q3 683 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 GOLGA8QA0A0J9YX86 632 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 GOLGA8OA6NCC3 632 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 GOLGA8NF8WBI6 632 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 KRT1P04264 644 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 PTPREP23469 700 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 SESN3P58005 492 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 SARM1Q6SZW1 724 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 CNOT10Q9H9A5 744 aaKnown RBP17.37■□□□□ 0.37
COL2A1-202ENST00000380518 DBNDD1Q9H9R9 158 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 OPHN1O60890 802 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 JADE1Q6IE81 842 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 MFAP3LO75121 409 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 SRGAP2BP0DMP2 458 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 MSH2P43246 934 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 MMEL1Q495T6 779 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 BBS5Q8N3I7 341 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 HVCN1Q96D96 273 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 BAG5Q9UL15 447 aa17.37■□□□□ 0.37
COL2A1-202ENST00000380518 TFAMQ00059 246 aaKnown RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 ALS2CLQ60I27 953 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 NEK9Q8TD19 979 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 HDAC11Q96DB2 347 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 APOL6Q9BWW8 343 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 AKT3Q9Y243 479 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 MED7O43513 233 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 TBC1D10BQ4KMP7 808 aaPredicted RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 RESP18Q5W5W9 173 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 EXOC4Q96A65 974 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 CPP00450 1065 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 CDK8P49336 464 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 ZKSCAN8Q15776 578 aaPredicted RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 UBE2SQ16763 222 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 ALKBH5Q6P6C2 394 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms