RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PANK4Q9NVE7 773 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PLA2G4BP0C869 781 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 MEA1Q16626 185 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 RSRC2Q7L4I2 434 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 CATSPER3Q86XQ3 398 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 CCDC155Q8N6L0 562 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 TBC1D5Q92609 795 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 SGIP1Q9BQI5 828 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 NDST4Q9H3R1 872 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PRR12Q9ULL5 1215 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 GUCA1BQ9UMX6 200 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 MEIS1O00470 390 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ZSCAN20P17040 1043 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 VWA3BQ502W6 1294 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ARSHQ5FYA8 562 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 TEX35Q5T0J7 233 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 RSBN1LQ6PCB5 846 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 GLT8D2Q9H1C3 349 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 OGFRQ9NZT2 677 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SIK3Q9Y2K2 1263 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 PCDHA2Q9Y5H9 948 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 CNTNAP1P78357 1384 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 PLEKP08567 350 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SPATA31C1P0DKV0 1188 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 CYP11B2P19099 503 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SLC12A3P55017 1021 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 PSMD2Q13200 908 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ZCWPW2Q504Y3 356 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM26FQ5R3K3 315 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 BTNL9Q6UXG8 535 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 MIGA2Q7L4E1 593 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 GPBP1Q86WP2 473 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NELFCDQ8IXH7 590 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 MYOCDQ8IZQ8 938 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 GMLQ99445 158 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 PLCD4Q9BRC7 762 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 GTPBP4Q9BZE4 634 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NT5C3AQ9H0P0 336 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM207AQ9NSI2 230 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 STK32BQ9NY57 414 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ZNF70Q9UC06 446 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SCAF8Q9UPN6 1271 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 KDM3AQ9Y4C1 1321 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 KCNA3P22001 575 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SREBF1P36956 1147 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 MMP14P50281 582 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ZBED6P86452 979 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 LRRC63Q05C16 580 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM83BQ5T0W9 1011 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NCAPH2Q6IBW4 605 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NAP1L4Q99733 375 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NUP58Q9BVL2 599 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 LRRC27Q9C0I9 530 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 TMEM39BQ9GZU3 492 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 BCAS3Q9H6U6 928 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 NHEJ1Q9H9Q4 299 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 POLD4Q9HCU8 107 aa8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-204ENST00000380176 CTAGE9A4FU28 777 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 MSH4O15457 936 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 SEC31AO94979 1220 aaKnown RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 VIL1P09327 827 aaKnown RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 CYP27A1Q02318 531 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 MAN2A1Q16706 1144 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 Q4G0T1 1027 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 FKBP15Q5T1M5 1219 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 MOXD1Q6UVY6 613 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 CCDC84Q86UT8 332 aaPredicted RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 SLFN12Q8IYM2 578 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 TTLL6Q8N841 843 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 FAM212AQ96EL1 285 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 LACRTQ9GZZ8 138 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 CDC23Q9UJX2 597 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 DUSP10Q9Y6W6 482 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 COL2A1P02458 1487 aaPredicted RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 MYH10P35580 1976 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 ZNF263O14978 683 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 CASP5P51878 434 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 STAT2P52630 851 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 CYP4A11Q02928 519 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -13e-8■□□□□ 9.8
PDLIM5-204ENST00000380176 DLGAP5Q15398 846 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 HERC4Q5GLZ8 1057 aaPredicted RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 SCFD1Q8WVM8 642 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 GLIS2Q9BZE0 524 aaPredicted RBP8.83□□□□□ -1
PDLIM5-204ENST00000380176 ZHX3Q9H4I2 956 aa8.83□□□□□ -1
PDLIM5-204ENST00000380176 MMRN2Q9H8L6 949 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms