RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 CCNE1P24864 410 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 C2orf54Q08AI8 447 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 MYOCDQ8IZQ8 938 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 GIMAP8Q8ND71 665 aaPredicted RBP17.29■□□□□ 0.36
BRF1-203ENST00000379937 RIN2Q8WYP3 895 aaPredicted RBP17.29■□□□□ 0.36
BRF1-203ENST00000379937 RAD54LQ92698 747 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
BRF1-203ENST00000379937 ESYT3A0FGR9 886 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 ANKRD65E5RJM6 399 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 H7C1D1 291 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
BRF1-203ENST00000379937 CNNM4Q6P4Q7 775 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 SYCP3Q8IZU3 236 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 JAKMIP2Q96AA8 810 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
BRF1-203ENST00000379937 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 TTC19Q6DKK2 380 aaPredicted RBP17.28■□□□□ 0.36
BRF1-203ENST00000379937 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 REEP2Q9BRK0 252 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 PACSIN1Q9BY11 444 aa17.28■□□□□ 0.36
BRF1-203ENST00000379937 RCAN1P53805 252 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 LRCH2Q5VUJ6 765 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 CCDC127Q96BQ5 260 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 WDR11Q9BZH6 1224 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 MSH4O15457 936 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 GAS7O60861 476 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 N4BP1O75113 896 aaKnown RBP17.27■□□□□ 0.36
BRF1-203ENST00000379937 SPA17Q15506 151 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
BRF1-203ENST00000379937 ZSWIM2Q8NEG5 633 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 ZDHHC15Q96MV8 337 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 SPAG5Q96R06 1193 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 CENPHQ9H3R5 247 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 REXO2Q9Y3B8 237 aaKnown RBP17.27■□□□□ 0.36
BRF1-203ENST00000379937 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.36
BRF1-203ENST00000379937 TMEM110-MUSTN1A8MSY1 372 aa17.27■□□□□ 0.35
BRF1-203ENST00000379937 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.35
BRF1-203ENST00000379937 MTMR2Q13614 643 aa17.27■□□□□ 0.35
BRF1-203ENST00000379937 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.35
BRF1-203ENST00000379937 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.35
BRF1-203ENST00000379937 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.35
BRF1-203ENST00000379937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.35
BRF1-203ENST00000379937 NPEPPSP55786 919 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 LMBRD2Q68DH5 695 aaPredicted RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 NFRKBQ6P4R8 1299 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 WDR59Q6PJI9 974 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 MTERF4Q7Z6M4 381 aaKnown RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 DNM3Q9UQ16 869 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 PNKPQ96T60 521 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 CCSER1Q9C0I3 900 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 WNT10BO00744 389 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 C2CD6Q53TS8 623 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 ZNF397Q8NF99 534 aaPredicted RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 MTMR9Q96QG7 549 aa17.26■□□□□ 0.35
BRF1-203ENST00000379937 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
BRF1-203ENST00000379937 TMEM179Q6ZVK1 233 aa17.25■□□□□ 0.35
BRF1-203ENST00000379937 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
BRF1-203ENST00000379937 CAPN6Q9Y6Q1 641 aa17.25■□□□□ 0.35
BRF1-203ENST00000379937 FAM13AO94988 1023 aa17.25■□□□□ 0.35
BRF1-203ENST00000379937 HHIPL2Q6UWX4 724 aa17.25■□□□□ 0.35
BRF1-203ENST00000379937 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
BRF1-203ENST00000379937 ZNF746Q6NUN9 644 aaPredicted RBP17.24■□□□□ 0.35
BRF1-203ENST00000379937 MMS19Q96T76 1030 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 TSG101Q99816 390 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 SPDYE2BA6NHP3 402 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 CCDC169A6NNP5 214 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 SPDYE6P0CI01 402 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 HERVK_113P62684 666 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
BRF1-203ENST00000379937 MOB2Q70IA6 237 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 TRIM31Q9BZY9 425 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 HMGCS2P54868 508 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
BRF1-203ENST00000379937 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 ANKRD7Q92527 254 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 FAM163AQ96GL9 167 aaPredicted RBP17.24■□□□□ 0.35
BRF1-203ENST00000379937 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
BRF1-203ENST00000379937 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
BRF1-203ENST00000379937 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
BRF1-203ENST00000379937 SPAG1Q07617 926 aa17.23■□□□□ 0.35
BRF1-203ENST00000379937 EIF2AK1Q9BQI3 630 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms