RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 SF3A3Q12874 501 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 TTC38Q5R3I4 469 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 KIRREL3Q8IZU9 778 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 TMTC2Q8N394 836 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 PROCA1Q8NCQ7 364 aaPredicted RBP15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 RBM12Q9NTZ6 932 aaKnown RBP15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 NFU1Q9UMS0 254 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 LAMB1P07942 1786 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 CYTH3O43739 400 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 KRT2P35908 639 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 HDLBPQ00341 1268 aaKnown RBP15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 IFT88Q13099 833 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
SNCAIP-203ENST00000379538 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 EPHB6O15197 1021 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 GLI1P08151 1106 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 NPY5RQ15761 445 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 NAA35Q5VZE5 725 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 NEDD1Q8NHV4 660 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 HPS3Q969F9 1004 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 TRIM47Q96LD4 638 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 RUFY1Q96T51 708 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 SNX12Q9UMY4 172 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 KIAA0754O94854 1291 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 HLA-DOAP06340 250 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 LSP1P33241 339 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 KRT83P78385 493 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 TRIM14Q14142 442 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 SEPT2Q15019 361 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 PHF20Q9BVI0 1012 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 IDI2Q9BXS1 227 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 MAD2L2Q9UI95 211 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 BUB1O43683 1085 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 ATP2C2O75185 946 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 PCP11498 1178 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 HPDP32754 393 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 SLC16A2P36021 539 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 FKBP1AP62942 108 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 SPAG1Q07617 926 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 GBP6Q6ZN66 633 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 RASGRP4Q8TDF6 673 aa15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-203ENST00000379538 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 GOLGA8KD6RF30 607 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TBC1D8BQ0IIM8 1120 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 HSF2BPO75031 334 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 IPO7O95373 1038 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TAL1P17542 331 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 KCTD1Q719H9 257 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 ADSSL1Q8N142 457 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 LRRC15Q8TF66 581 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 RPGRIP1Q96KN7 1286 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 PPANQ9NQ55 473 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 PI4KBQ9UBF8 816 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
SNCAIP-203ENST00000379538 CNTNAP1P78357 1384 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 DDNO94850 711 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 PDHBP11177 359 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 NAP1L1P55209 391 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 MEA1Q16626 185 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 RASSF8Q8NHQ8 419 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 FERMT2Q96AC1 680 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 TTYH3Q9C0H2 523 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 FAM207AQ9NSI2 230 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 STIM2Q9P246 746 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 OPA1O60313 960 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 GH2P01242 217 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 EPS15P42566 896 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 SNAP25P60880 206 aa15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-203ENST00000379538 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms