RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TBC1D12O60347 775 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 EGFRP00533 1210 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 ZNF76P36508 570 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 PSMD2Q13200 908 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 ELF2Q15723 593 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
PRNP-201ENST00000379440 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 MYOZ2Q9NPC6 264 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
PRNP-201ENST00000379440 CAPN11Q9UMQ6 739 aa16.51■□□□□ 0.23
PRNP-201ENST00000379440 CYP11B2P19099 503 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 UBXN2AP68543 259 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
PRNP-201ENST00000379440 TULP2O00295 520 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 TBX3O15119 743 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 CIITAP33076 1130 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 ARSHQ5FYA8 562 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 MYOCDQ8IZQ8 938 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
PRNP-201ENST00000379440 FEZ1Q99689 392 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
PRNP-201ENST00000379440 TRIM21P19474 475 aaKnown RBP16.49■□□□□ 0.23
PRNP-201ENST00000379440 SLC12A3P55017 1021 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 CYP4A11Q02928 519 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 ERCC6LQ2NKX8 1250 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 CHURC1Q8WUH1 139 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
PRNP-201ENST00000379440 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
PRNP-201ENST00000379440 HAUS3Q68CZ6 603 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 DNAJC7Q99615 494 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 TTYH3Q9C0H2 523 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
PRNP-201ENST00000379440 CYP3A4P08684 503 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■■■□□ 17.5
PRNP-201ENST00000379440 RASA3Q14644 834 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
PRNP-201ENST00000379440 NELFCDQ8IXH7 590 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 FAM20AQ96MK3 541 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 VAV3Q9UKW4 847 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 PCDHA2Q9Y5H9 948 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 EML1O00423 815 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
PRNP-201ENST00000379440 TGFB2P61812 414 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 VWA3BQ502W6 1294 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 CCDC65Q8IXS2 484 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 CARD6Q9BX69 1037 aa16.48■□□□□ 0.23
PRNP-201ENST00000379440 GCOM1H8Y6P7 765 aaPredicted RBP16.47■□□□□ 0.23
PRNP-201ENST00000379440 POLR2MP0CAP2 368 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 RPA1P27694 616 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 NDST4Q9H3R1 872 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 RGL1Q9NZL6 768 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 EPN1Q9Y6I3 576 aaPredicted RBP16.47■□□□□ 0.23
PRNP-201ENST00000379440 CAPN2P17655 700 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 DGKZQ13574 1117 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 TSG101Q99816 390 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 ZNF341Q9BYN7 854 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
PRNP-201ENST00000379440 REXO2Q9Y3B8 237 aaKnown RBP16.47■□□□□ 0.23
PRNP-201ENST00000379440 NFKBIEO00221 500 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 NDUFA10O95299 355 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 ASNSP08243 561 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 INPP5BP32019 993 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 ARHGAP29Q52LW3 1261 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 OGFRQ9NZT2 677 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 TRAF5O00463 557 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
PRNP-201ENST00000379440 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.23
PRNP-201ENST00000379440 KIF4BQ2VIQ3 1234 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 ZNF569Q5MCW4 686 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 FAM43BQ6ZT52 329 aaPredicted RBP16.46■□□□□ 0.23
PRNP-201ENST00000379440 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 NUP58Q9BVL2 599 aa16.46■□□□□ 0.23
PRNP-201ENST00000379440 ASTN2O75129 1339 aaPredicted RBP16.46■□□□□ 0.22
PRNP-201ENST00000379440 EPHB6O15197 1021 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms