RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 NDNQ99608 321 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 CIB2O75838 187 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 GSTA2P09210 222 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 SERPINB3P29508 390 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 GSTT1P30711 240 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 SARSP49591 514 aaKnown RBP11.9□□□□□ -0.51
USP6NL-202ENST00000379237 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 GCKRQ14397 625 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.51
USP6NL-202ENST00000379237 CFAP61Q8NHU2 1237 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 ADAMTS1Q9UHI8 967 aa11.9□□□□□ -0.51
USP6NL-202ENST00000379237 ZC3H4Q9UPT8 1303 aaKnown RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 GRID2IPA4D2P6 1211 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TRAF5O00463 557 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 PRLRP16471 622 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 DPYDQ12882 1025 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 SLC5A9Q2M3M2 681 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TBK1Q9UHD2 729 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 SNX24Q9Y343 169 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 SUPT3HO75486 399 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 FYB2Q5VWT5 728 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 SPATA24Q86W54 205 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 CALML4Q96GE6 196 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 LRRC37BQ96QE4 947 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 CYTH2Q99418 400 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 PIDD1Q9HB75 910 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 CRB1P82279 1406 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 UBE2Q2LH0YL09 131 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TMCC1O94876 653 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 GDF3Q9NR23 364 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TRIM33Q9UPN9 1127 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 ASAP2O43150 1006 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 PMS2P54278 862 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 CCDC62Q6P9F0 684 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 ANKRD27Q96NW4 1050 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
USP6NL-202ENST00000379237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-202ENST00000379237 FLT4P35916 1363 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 TTI1O43156 1089 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 HOXB7P09629 217 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 SLC44A4Q53GD3 710 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 CCDC105Q8IYK2 499 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 P2RX5Q93086 422 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 ERP27Q96DN0 273 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 PBKQ96KB5 322 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 LSM14BQ9BX40 385 aaKnown RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 CNOT8Q9UFF9 292 aaKnown RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 ANKRD33BA6NCL7 494 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 PBX1P40424 430 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 GRAMD4Q6IC98 578 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 RFX8Q6ZV50 586 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 NME8Q8N427 588 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 CUEDC2Q9H467 287 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 SLC4A7Q9Y6M7 1214 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 MAPK13O15264 365 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 ATP9AO75110 1047 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 CALB2P22676 271 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 ARHGAP24Q8N264 748 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 MIS12Q9H081 205 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
USP6NL-202ENST00000379237 AMFRQ9UKV5 643 aa11.88□□□□□ -0.51
USP6NL-202ENST00000379237 ATP5HO75947 161 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 SHBGP04278 402 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 TARSP26639 723 aaKnown RBP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ZAP70P43403 619 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 NCALDP61601 193 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 NT5DC1Q5TFE4 455 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 NDST4Q9H3R1 872 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 MAGEA13PA6NCF6 341 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 CCDC188H7C350 402 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 SRGNP10124 158 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 IMPDH2P12268 514 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms