RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 PKN2Q16513 984 aaKnown RBP8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 KLHDC7AQ5VTJ3 777 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 TADA2BQ86TJ2 420 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 NELFBQ8WX92 580 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 DNAJC7Q99615 494 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 NFS1Q9Y697 457 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 SLC1A4P43007 532 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 LRRC41Q15345 812 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 ASTE1Q2TB18 679 aaPredicted RBP8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 CAPNS2Q96L46 248 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 ARHGEF10LQ9HCE6 1279 aa8.18□□□□□ -1.1
GPCPD1-201ENST00000379019 DMDP11532 3685 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 ZFYP08048 801 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 GUCY2FP51841 1108 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 ZRSR1Q15695 479 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 TAF3Q5VWG9 929 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 BCAS4Q8TDM0 211 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 ZBTB12Q9Y330 459 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 CACNB1Q02641 598 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 HDXQ7Z353 690 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 IQCKQ8N0W5 287 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 CERS5Q8N5B7 392 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 ZKSCAN4Q969J2 545 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 FAXDC2Q96IV6 333 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 NHEJ1Q9H9Q4 299 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 GNRH1P01148 92 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 TM4SF4P48230 202 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 HERC5Q9UII4 1024 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 ZNF112Q9UJU3 913 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 CPP00450 1065 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 UBXN1Q04323 297 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 RNASELQ05823 741 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 BRD3Q15059 726 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 JAKMIP3Q5VZ66 844 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 MB21D1Q8N884 522 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 SPATA4Q8NEY3 305 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 BAP1Q92560 729 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
GPCPD1-201ENST00000379019 CTAGE9A4FU28 777 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 TP73O15350 636 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 PRDX5P30044 214 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 MEA1Q16626 185 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 PALB2Q86YC2 1186 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 NUP88Q99567 741 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 NAPGQ99747 312 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 GLIS2Q9BZE0 524 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 FTCDO95954 541 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 PRMT2P55345 433 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 KIAA0825Q8IV33 1275 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 ADSSL1Q8N142 457 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 ADAM7Q9H2U9 754 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 FOCADQ5VW36 1801 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 N4BP3O15049 544 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 PAX7P23759 505 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 LLGL1Q15334 1064 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 ATL3Q6DD88 541 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 RASAL3Q86YV0 1011 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CASKIN2Q8WXE0 1202 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 DEFB129Q9H1M3 183 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 FAM207AQ9NSI2 230 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 NPHP3-ACAD11A0A0J9YXS1 232 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 SHBGP04278 402 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 KCNA1Q09470 495 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 SAFBQ15424 915 aaKnown RBP eCLIP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 RRAGBQ5VZM2 374 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CST9Q5W186 159 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 SH3RF3Q8TEJ3 882 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 FAM107BQ9H098 131 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 SIK3Q9Y2K2 1263 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 PPFIA4O75335 1185 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CASP5P51878 434 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 HUNKP57058 714 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 ATP2C1P98194 919 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CRACR2AQ9BSW2 395 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CELF4Q9BZC1 486 aaKnown RBP8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 TMEM260Q9NX78 707 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 AATFQ9NY61 560 aaKnown RBP eCLIP8.16□□□□□ -1.13e-6■□□□□ 8.5
GPCPD1-201ENST00000379019 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 CSADQ9Y600 493 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
GPCPD1-201ENST00000379019 KAT6AQ92794 2004 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 TNNT3P45378 269 aaPredicted RBP8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 GTF2A2P52657 109 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms