RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 PHBP35232 272 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 HERC4Q5GLZ8 1057 aaPredicted RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 SETBP1Q9Y6X0 1596 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 CRB1P82279 1406 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 KRT75O95678 551 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ATICP31939 592 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 MGARPQ8TDB4 240 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 CCT7Q99832 543 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 TUBE1Q9UJT0 475 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 SLC39A2Q9NP94 309 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ZSWIM5Q9P217 1185 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 PDE8AO60658 829 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 MYCLP1P12525 358 aaPredicted RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SCG2P13521 617 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 TCIRG1Q13488 830 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 FAM133BQ5BKY9 247 aaKnown RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 CARD9Q9H257 536 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SYNCQ9H7C4 482 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 PPP1R9AQ9ULJ8 1098 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 GMNNO75496 209 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 TNFAIP3P21580 790 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 LIFRP42702 1097 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 TBL3Q12788 808 aaKnown RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 NDUFB5O43674 189 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 CIAO1O76071 339 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 CHGBP05060 677 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 POLR2FP61218 127 aaKnown RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SMC6Q96SB8 1091 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 MAK16Q9BXY0 300 aaKnown RBP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
NPHS1-202ENST00000378910 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
NPHS1-202ENST00000378910 SPDYE3A6NKU9 549 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 SPOPO43791 374 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 ADD2P35612 726 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 PHKA1P46020 1223 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 SYNPO2Q9UMS6 1093 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 TTC30AQ86WT1 665 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 ANKRD42Q8N9B4 389 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 P2RX5Q93086 422 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 DHTKD1Q96HY7 919 aaPredicted RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 SLC39A3Q9BRY0 314 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 RNF14Q9UBS8 474 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 GDAQ9Y2T3 454 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 DDHD2O94830 711 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 PDE1BQ01064 536 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
NPHS1-202ENST00000378910 SEPT10Q9P0V9 454 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 ZNF180Q9UJW8 692 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 AMFRQ9UKV5 643 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 JAG2Q9Y219 1238 aa12.8□□□□□ -0.36
NPHS1-202ENST00000378910 TRIM64CA6NLI5 447 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 USP17L21D6R901 530 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 EIF4BP23588 611 aaKnown RBP12.79□□□□□ -0.36
NPHS1-202ENST00000378910 SERPINB3P29508 390 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 GJC1P36383 396 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 IFNAR2P48551 515 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 MIS18BP1Q6P0N0 1132 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.79□□□□□ -0.36
NPHS1-202ENST00000378910 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
NPHS1-202ENST00000378910 P3H4Q92791 437 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
NPHS1-202ENST00000378910 ATP2A1O14983 1001 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms