RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 H3BRB1 525 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 BLOC1S2Q6QNY1 142 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 SERINC5Q86VE9 423 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 GPR20Q99678 358 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 TUT1Q9H6E5 874 aaKnown RBP21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 RTEL1Q9NZ71 1219 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 PTPRSQ13332 1948 aa21.74■■□□□ 1.07
TMEM88B-201ENST00000378821 ZBBXA8MT70 800 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 NBNO60934 754 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 LGALS2P05162 132 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 MICU3Q86XE3 530 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 WNT8BQ93098 351 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 PRDM12Q9H4Q4 367 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 RBM28Q9NW13 759 aaKnown RBP21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 BRPF3Q9ULD4 1205 aa21.73■■□□□ 1.07
TMEM88B-201ENST00000378821 TRANK1O15050 2925 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 SORBS3O60504 671 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 MYOGP15173 224 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 RPS6KB1P23443 525 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 RCAN1P53805 252 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 ZNF200P98182 395 aaPredicted RBP21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 SYNE3Q6ZMZ3 975 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 CYFIP1Q7L576 1253 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 GPRASP2Q96D09 838 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 GAS2L1Q99501 681 aaPredicted RBP21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 FTOQ9C0B1 505 aaKnown RBP eCLIP21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 CNTNAP5Q8WYK1 1306 aa21.72■■□□□ 1.07
TMEM88B-201ENST00000378821 ITGB5P18084 799 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 PSMA5P28066 241 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 ADGRE1Q14246 886 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 Q6ZUG5 572 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 NLRX1Q86UT6 975 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 CCDC82Q8N4S0 544 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 GIMAP8Q8ND71 665 aaPredicted RBP21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 FAM217BQ9NTX9 383 aaPredicted RBP21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 UBIAD1Q9Y5Z9 338 aa21.71■■□□□ 1.07
TMEM88B-201ENST00000378821 MYO9BQ13459 2157 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 hCG_1642624A0A1W2PR95 340 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 NOP56O00567 594 aaKnown RBP21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 SEC24BO95487 1268 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 ADAM17P78536 824 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 MBTPS1Q14703 1052 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 ZNF618Q5T7W0 954 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 CNKSR3Q6P9H4 555 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 HERC6Q8IVU3 1022 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 USP38Q8NB14 1042 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 CDHR1Q96JP9 859 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 COL25A1Q9BXS0 654 aaPredicted RBP21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 TELO2Q9Y4R8 837 aa21.7■■□□□ 1.06
TMEM88B-201ENST00000378821 KLF18A0A0U1RQI7 1052 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 MAFGO15525 162 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 ZBTB43O43298 467 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 ATP9AO75110 1047 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 SMIM10L2AP0DMW4 78 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 SMIM10L2BP0DMW5 78 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 KCNA2P16389 499 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 FGD1P98174 961 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 C8orf34Q49A92 452 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 PPP2R2DQ66LE6 453 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 WWC2Q6AWC2 1192 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 RNPEPQ9H4A4 650 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 ZSWIM6Q9HCJ5 1215 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 PCDHA6Q9UN73 950 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 PCDHA8Q9Y5H6 950 aa21.69■■□□□ 1.06
TMEM88B-201ENST00000378821 ABHD14A-ACY1A0A1B0GW23 586 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 C17orf102A2RUQ5 167 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 CAND2O75155 1236 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 POU3F3P20264 500 aaPredicted RBP21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 WDR5P61964 334 aaKnown RBP21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 APOBRQ0VD83 1088 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 MKRN4PQ13434 485 aaPredicted RBP21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 UBE2SQ16763 222 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 RTN1Q16799 776 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 TCTN1Q2MV58 587 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 TYW1BQ6NUM6 668 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 PPP1R18Q6NYC8 613 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 RUFY3Q7L099 469 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 HEATR3Q7Z4Q2 680 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 BRF1Q92994 677 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 ATP6V0A1Q93050 837 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 AGXT2Q9BYV1 514 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 TM6SF1Q9BZW5 370 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 RIC8AQ9NPQ8 531 aa21.68■■□□□ 1.06
TMEM88B-201ENST00000378821 CUL9Q8IWT3 2517 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 EMSYQ7Z589 1322 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 hCG_1984214I3L0E3 225 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 EFCAB14O75071 495 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 CA3P07451 260 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 ZNF713Q8N859 430 aaPredicted RBP21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 JADE2Q9NQC1 790 aa21.67■■□□□ 1.06
TMEM88B-201ENST00000378821 SPDYE3A6NKU9 549 aa21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 GOLGA8BA8MQT2 603 aa21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 TREHO43280 583 aa21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 TAP1Q03518 808 aa21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 ZNF215Q9UL58 517 aaPredicted RBP21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 NAP1L2Q9ULW6 460 aaPredicted RBP21.66■■□□□ 1.06
TMEM88B-201ENST00000378821 CYP46A1Q9Y6A2 500 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms