RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 RIOK1Q9BRS2 568 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 EBF2Q9HAK2 575 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 HOMER3Q9NSC5 361 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 ATP8A2Q9NTI2 1148 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 ARPP21Q9UBL0 812 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 TFR2Q9UP52 801 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 DAAM1Q9Y4D1 1078 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CCT8L1PA6NM43 557 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 PPIP5K2O43314 1243 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 FAM153BP0C7A2 387 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CTNNA1P35221 906 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF844Q08AG5 666 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 BYSLQ13895 437 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 FAM153CQ494X1 144 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 RASGEF1CQ8N431 466 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 CHMP6Q96FZ7 201 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 OSBPL7Q9BZF2 842 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 RAB34Q9BZG1 259 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 TRIM6Q9C030 488 aaPredicted RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 MMRN2Q9H8L6 949 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 FAM153AQ9UHL3 310 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 TPX2Q9ULW0 747 aaKnown RBP9.01□□□□□ -0.97
PTPRR-203ENST00000378778 LEMD3Q9Y2U8 911 aa9.01□□□□□ -0.97
PTPRR-203ENST00000378778 TOGARAM1Q9Y4F4 1720 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC189A1A4V9 331 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 MINDY4BA8MYZ0 360 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PGRMC1O00264 195 aaKnown RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 RAD51CO43502 376 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 COBLO75128 1261 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PALMO75781 387 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PLCG1P19174 1290 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 DRD4P21917 467 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 RASSF7Q02833 373 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 GRM4Q14833 912 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 TTC19Q6DKK2 380 aaPredicted RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 CPLX4Q7Z7G2 160 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 CFAP61Q8NHU2 1237 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 CUL5Q93034 780 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 HVCN1Q96D96 273 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PGM2Q96G03 612 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 NAP1L3Q99457 506 aaPredicted RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 PSMD1Q99460 953 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 TMEM109Q9BVC6 243 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 TRMT112Q9UI30 125 aaKnown RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 RTN2O75298 545 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 TRIM37O94972 964 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 KIF4AO95239 1232 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PLEKP08567 350 aaPredicted RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 NUDT17P0C025 328 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 SLC1A4P43007 532 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 KLK7P49862 253 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF131P52739 623 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 SEC24CP53992 1094 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 STK4Q13043 487 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 LRCH2Q5VUJ6 765 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 TCP11Q8WWU5 503 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 RAPGEF5Q92565 580 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 BUD13Q9BRD0 619 aaKnown RBP eCLIP9□□□□□ -0.97
PTPRR-203ENST00000378778 RAB17Q9H0T7 212 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PPANQ9NQ55 473 aaKnown RBP9□□□□□ -0.97
PTPRR-203ENST00000378778 PCDHA6Q9UN73 950 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 PCDHA8Q9Y5H6 950 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 SCN7AQ01118 1682 aa9□□□□□ -0.97
PTPRR-203ENST00000378778 RAD21O60216 631 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 PPFIA2O75334 1257 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ALADP13716 330 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 GNA11P29992 359 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ECHS1P30084 290 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 IGHMBP2P38935 993 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 FKBP3Q00688 224 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 PDIA5Q14554 519 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 BTNL9Q6UXG8 535 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 BARHL2Q9NY43 387 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 TMOD3Q9NYL9 352 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 SUCLA2Q9P2R7 463 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 CNOT7Q9UIV1 285 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 FBXL5Q9UKA1 691 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 SLC12A4Q9UP95 1085 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 COL4A3BPQ9Y5P4 624 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 CICQ96RK0 1608 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 TNRC6CQ9HCJ0 1690 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ESYT2A0FGR8 921 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 FAM187AA6NFU0 413 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 DNM1LO00429 736 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 LUC7L3O95232 432 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ATP6V1G2O95670 118 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 IL2RBP14784 551 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 GBP2P32456 591 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 FXR2P51116 673 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 GUCY2FP51841 1108 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms