RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MTMR2Q13614 643 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 TCP11X2Q5H9J9 407 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 NBPF11Q86T75 865 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 ZBTB8OSQ8IWT0 167 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 AGBL3Q8NEM8 1001 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 KCNQ5Q9NR82 932 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 ABCB11O95342 1321 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 IPO5O00410 1097 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 KIAA0754O94854 1291 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 CD19P15391 556 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 PDXDC2PQ6P474 469 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 U2AF1L4Q8WU68 220 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 OTUD5Q96G74 571 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 PCIF1Q9H4Z3 704 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 LRRC63Q05C16 580 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 CXCL9Q07325 125 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 MTERF2Q49AM1 385 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 CCDC50Q8IVM0 306 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 ENGASEQ8NFI3 743 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 RPAP3Q9H6T3 665 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-203ENST00000378679 ABCB4P21439 1286 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 RAD54LQ92698 747 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 NDST4Q9H3R1 872 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 THAP9Q9H5L6 903 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 HAUS4Q9H6D7 363 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 PVALEFA0A1B0GWK0 134 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 H0YCG3 227 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 GTF2A1P52655 376 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 SMC1AQ14683 1233 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 HOOK3Q86VS8 718 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 ACER1Q8TDN7 264 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 GDAP1L1Q96MZ0 367 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 PLCD4Q9BRC7 762 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 ACTN2P35609 894 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 PSMC2P35998 433 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 PTPAQ15257 358 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 CEP55Q53EZ4 464 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM160B1Q5W0V3 765 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 IL17RBQ9NRM6 502 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 GGA3Q9NZ52 723 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
SHROOM1-203ENST00000378679 SMARCA1P28370 1054 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 APBB1IPQ7Z5R6 666 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 NSUN6Q8TEA1 469 aaKnown RBP15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM217BQ9NTX9 383 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 VAV2P52735 878 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 IQCB1Q15051 598 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 RETREG2Q8NC44 543 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 BANK1Q8NDB2 785 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 DYDC2Q96IM9 177 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 MNAT1P51948 309 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 TNNC1P63316 161 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 GABPB1Q06547 395 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 SFR1Q86XK3 245 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 BPIFA3Q9BQP9 254 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 MTFR1LQ9H019 292 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 DDX4Q9NQI0 724 aaKnown RBP15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM184BQ9ULE4 1060 aa15.55■□□□□ 0.08
SHROOM1-203ENST00000378679 PRELPP51888 382 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 PDIA5Q14554 519 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 MIS18BP1Q6P0N0 1132 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 CEP104O60308 925 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 ECE1P42892 770 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 TOB1P50616 345 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 TUBB2AQ13885 445 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 MSANTD4Q8NCY6 345 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 PPP1R13BQ96KQ4 1090 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 TUBB2BQ9BVA1 445 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 RGL1Q9NZL6 768 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 TUBBP07437 444 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 CCDC144BQ3MJ40 725 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 LPAR1Q92633 364 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 ACCSQ96QU6 501 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 SAR1BQ9Y6B6 198 aa15.54■□□□□ 0.08
SHROOM1-203ENST00000378679 ATP2C2O75185 946 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 SEC31AO94979 1220 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 AFPP02771 609 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 PEX3P56589 373 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 PEX26Q7Z412 305 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 HPS3Q969F9 1004 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 MYO1AQ9UBC5 1043 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 SOWAHDA6NJG2 315 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 INO80B-WBP1J3KQ70 363 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 FCER1AP12319 257 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 RPS6KA1Q15418 735 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 PKN1Q16512 942 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 INO80BQ9C086 356 aaPredicted RBP15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 NBPF3Q9H094 633 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 WDR64B1ANS9 1081 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms