RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 IFNAR2P48551 515 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 CHRNDQ07001 517 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 GREM2Q9H772 168 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 KIAA1024Q9UPX6 916 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 MROH7-TTC4A0A0A0MT08 1334 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 MAP3K15Q6ZN16 1313 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 IRX2Q9BZI1 471 aaPredicted RBP15.72■□□□□ 0.11
PRDM16-203ENST00000378391 ACTR5Q9H9F9 607 aaPredicted RBP15.72■□□□□ 0.11
PRDM16-203ENST00000378391 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 ANKRD65E5RJM6 399 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 NNTQ13423 1086 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 EMBQ6PCB8 327 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 KRT26Q7Z3Y9 468 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 THEGQ9P2T0 379 aa15.72■□□□□ 0.11
PRDM16-203ENST00000378391 FRMPD2Q68DX3 1309 aaPredicted RBP15.72■□□□□ 0.11
PRDM16-203ENST00000378391 ANKRD35Q8N283 1001 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 EIF2AQ9BY44 585 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 ADGRG1Q9Y653 693 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 CTNND1O60716 968 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 RPSAP08865 295 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 POLR2MP0CAP2 368 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 LIG4P49917 911 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 FAM102BQ5T8I3 360 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 REXO1L1PQ8IX06 675 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 SH3BP5O60239 455 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 BAG2O95816 211 aa15.71■□□□□ 0.11
PRDM16-203ENST00000378391 AFPP02771 609 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 NHEJ1Q9H9Q4 299 aaPredicted RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 UTP6Q9NYH9 597 aaKnown RBP15.71■□□□□ 0.11
PRDM16-203ENST00000378391 GTF2IP78347 998 aa15.71■□□□□ 0.1
PRDM16-203ENST00000378391 PTK2Q05397 1052 aa15.71■□□□□ 0.1
PRDM16-203ENST00000378391 MESDQ14696 234 aa15.71■□□□□ 0.1
PRDM16-203ENST00000378391 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.1
PRDM16-203ENST00000378391 GPATCH4Q5T3I0 446 aaKnown RBP15.71■□□□□ 0.1
PRDM16-203ENST00000378391 GNPTABQ3T906 1256 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 NUDCD3Q8IVD9 361 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 WDR75Q8IWA0 830 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 ZNF446Q9NWS9 450 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 TUBE1Q9UJT0 475 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 ATP8A1Q9Y2Q0 1164 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 MAGEA9P43362 315 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 NSMCE1Q8WV22 266 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 SPDL1Q96EA4 605 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 PCDHA1Q9Y5I3 950 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 TRIM66O15016 1216 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 TEX33O43247 280 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 STAM2O75886 525 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 MFAP3P55082 362 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 EIF3BP55884 814 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 BASP1P80723 227 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 C2orf54Q08AI8 447 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 XKR9Q5GH70 373 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 GAP43P17677 238 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 PSMC2P35998 433 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 DHX9Q08211 1270 aaKnown RBP15.7■□□□□ 0.1
PRDM16-203ENST00000378391 KRT81Q14533 505 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 BSPRYQ5W0U4 402 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 CYB5R4Q7L1T6 521 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 KLHL29Q96CT2 875 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
PRDM16-203ENST00000378391 SYF2O95926 243 aaKnown RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 EIF4A3P38919 411 aaKnown RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 PLTPP55058 493 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 IRX1P78414 480 aaPredicted RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 TCP11Q8WWU5 503 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 TRIM11Q96F44 468 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 GINS2Q9Y248 185 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ARIH1Q9Y4X5 557 aaPredicted RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 EIF3CLB5ME19 914 aaKnown RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 hCG_1984214I3L0E3 225 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 MYL7Q01449 175 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 FLOT2Q14254 428 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 TBC1D10CQ8IV04 446 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ZNF713Q8N859 430 aaPredicted RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ARMC2Q8NEN0 867 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 EIF3CQ99613 913 aaKnown RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 NR1D1P20393 614 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 PHEXP78562 749 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 SEPT2Q15019 361 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
PRDM16-203ENST00000378391 CAPN12Q6ZSI9 719 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 SRLQ86TD4 932 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 HAUS2Q9NVX0 235 aa15.69■□□□□ 0.1
PRDM16-203ENST00000378391 PNMA2Q9UL42 364 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms