RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GNGT1P63211 74 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-201ENST00000378156 PFKFB3Q16875 520 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-201ENST00000378156 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 THAP9Q9H5L6 903 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-201ENST00000378156 JCADQ9P266 1359 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 RASSF2P50749 326 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 GUCY2DQ02846 1103 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 STK10O94804 968 aaKnown RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 RASA3Q14644 834 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 ADAT2Q7Z6V5 191 aaKnown RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 MB21D1Q8N884 522 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 USH1CQ9Y6N9 552 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 CASQ2O14958 399 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 HOXA13P31271 388 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 IGBP1P78318 339 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 PPP1R21Q6ZMI0 780 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 CEP170P1Q96L14 293 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 TECPR2O15040 1411 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 PDE6CP51160 858 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 CCDC62Q6P9F0 684 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 JPH2Q9BR39 696 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-201ENST00000378156 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 SENP2Q9HC62 589 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 FAN1Q9Y2M0 1017 aa16.37■□□□□ 0.21
NPHP4-201ENST00000378156 ECE2O60344 883 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 PLA2G4BP0C869 781 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 CTNNA1P35221 906 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 EIF4A3P38919 411 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 RPUSD2Q8IZ73 545 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 SEPT2Q15019 361 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 SEPT14Q6ZU15 432 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 GPSM2P81274 684 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 CEP95Q96GE4 821 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 EPC1Q9H2F5 836 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 ZBTB5O15062 677 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 VPS72Q15906 364 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 GKAP1Q5VSY0 366 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 RNF10Q8N5U6 811 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 MRRFQ96E11 262 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 DPH5Q9H2P9 285 aa16.36■□□□□ 0.21
NPHP4-201ENST00000378156 PPANQ9NQ55 473 aaKnown RBP16.36■□□□□ 0.21
NPHP4-201ENST00000378156 DIP2AQ14689 1571 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PPLO60437 1756 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 GOLGA8KD6RF30 607 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 MOCS3O95396 460 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 OSBPP22059 807 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 CNGA1P29973 690 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PRCPP42785 496 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 CCZ1BP86790 482 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 CCZ1P86791 482 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 C2orf54Q08AI8 447 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 RNF169Q8NCN4 708 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 BAIAP2L1Q9UHR4 511 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PSMD2Q13200 908 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 KCNB2Q92953 911 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 ARHGEF2Q92974 986 aaKnown RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 ACCSQ96QU6 501 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 NDST4Q9H3R1 872 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 SLC8A1P32418 973 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 TFDP1Q14186 410 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 PPP2R5EQ16537 467 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 NAA35Q5VZE5 725 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 MARCH10Q8NA82 808 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 KRT12Q99456 494 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 KMT5AQ9NQR1 393 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 GMNNO75496 209 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 CSF1RP07333 972 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 MYL7Q01449 175 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 BCAS4Q8TDM0 211 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
NPHP4-201ENST00000378156 FBXO2Q9UK22 296 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-201ENST00000378156 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
NPHP4-201ENST00000378156 PREX1Q8TCU6 1659 aa16.34■□□□□ 0.21
NPHP4-201ENST00000378156 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms