RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TISP43B9A030 160 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ASNSP08243 561 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 IL1R1P14778 569 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PEX3P56589 373 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF746Q6NUN9 644 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 NLRX1Q86UT6 975 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 FAM133AQ8N9E0 248 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SAAL1Q96ER3 474 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PDLIM2Q96JY6 352 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 DNAJC18Q9H819 358 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.97
CKAP2-203ENST00000378037 PLEKP08567 350 aaPredicted RBP8.96□□□□□ -0.97
CKAP2-203ENST00000378037 KRT19P08727 400 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 SRGAP2CP0DJJ0 459 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 CNGA1P29973 690 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 LONP1P36776 959 aaKnown RBP8.96□□□□□ -0.97
CKAP2-203ENST00000378037 NUMBP49757 651 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 EVCP57679 992 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 C2CD6Q53TS8 623 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 ZBTB33Q86T24 672 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 IFT81Q8WYA0 676 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 JAKMIP2Q96AA8 810 aa8.96□□□□□ -0.97
CKAP2-203ENST00000378037 CETN3O15182 167 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 ARP10275 920 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 SPAG1Q07617 926 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 TNFAIP1Q13829 316 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 HAUS3Q68CZ6 603 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 GJB7Q6PEY0 223 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 WDR11Q9BZH6 1224 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 BCCIPQ9P287 314 aaKnown RBP eCLIP8.96□□□□□ -0.98
CKAP2-203ENST00000378037 SWAP70Q9UH65 585 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 CACNA1FO60840 1977 aa8.96□□□□□ -0.98
CKAP2-203ENST00000378037 PPP1R11O60927 126 aaPredicted RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 CAVIN2O95810 425 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 CASP4P49662 377 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 TMEM62Q0P6H9 643 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 PPM1KQ8N3J5 372 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 TRPM4Q8TD43 1214 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 ZBTB10Q96DT7 871 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 MRRFQ96E11 262 aaKnown RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 ADAMTS1Q9UHI8 967 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 URB1O60287 2271 aaKnown RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 RFX7Q2KHR2 1363 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 TTC26A0AVF1 554 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 PPP4CP60510 307 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 KIF5AQ12840 1032 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 CRY2Q49AN0 593 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 GOLGA6L1Q8N7Z2 621 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 CEP170P1Q96L14 293 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 GSDMAQ96QA5 445 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 WDR24Q96S15 920 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 LZTS2Q9BRK4 669 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 TRIM9Q9C026 710 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 CCDC113Q9H0I3 377 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 MLXIPQ9HAP2 919 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 SLC16A4O15374 487 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 VPS41P49754 854 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 GJC2Q5T442 439 aaPredicted RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 RNF207Q6ZRF8 634 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 KLHL7Q8IXQ5 586 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 SLC35F6Q8N357 371 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 P2RX5Q93086 422 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 ALDH8A1Q9H2A2 487 aaPredicted RBP8.95□□□□□ -0.98
CKAP2-203ENST00000378037 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 DUSP10Q9Y6W6 482 aa8.95□□□□□ -0.98
CKAP2-203ENST00000378037 FAM86B1E9PN63 330 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 IPO5O00410 1097 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 NKRFO15226 690 aaKnown RBP eCLIP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 FTCDO95954 541 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 FAM86B2P0C5J1 330 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 TNNI1P19237 187 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 GYS2P54840 703 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 RPS6P62753 249 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 GSPT2Q8IYD1 628 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 MRFAP1L1Q96HT8 127 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 TAAR1Q96RJ0 339 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 ANAPC4Q9UJX5 808 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 TRPC6Q9Y210 931 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 CNTRLQ7Z7A1 2325 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 MED24O75448 989 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 ABL1P00519 1130 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 MYBP10242 640 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 EPC2Q52LR7 807 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 SWSAP1Q6NVH7 229 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 NLRP4Q96MN2 994 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE1Q96RT6 745 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 FGFBP2Q9BYJ0 223 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 LAMA3Q16787 3333 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms