RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 BAIAP2L1Q9UHR4 511 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 DACH1Q9UI36 760 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
FXN-201ENST00000377270 PARP1P09874 1014 aaKnown RBP17.02■□□□□ 0.32
FXN-201ENST00000377270 AFMP43652 599 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 GPSM2P81274 684 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
FXN-201ENST00000377270 RBL2Q08999 1139 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 SLMAPQ14BN4 828 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 TEKT4Q8WW24 435 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 PHF24Q9UPV7 400 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 A0A1B0GTH6 734 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 LAMB1P07942 1786 aa17.02■□□□□ 0.32
FXN-201ENST00000377270 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 TARSL2A2RTX5 802 aaKnown RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 KBTBD12Q3ZCT8 623 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 CCDC80Q76M96 950 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 TRMT44Q8IYL2 757 aaKnown RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 GDAP1L1Q96MZ0 367 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 TRAIPQ9BWF2 469 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 MAST2Q6P0Q8 1798 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 ADAMTS3O15072 1205 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 GNAQP50148 359 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 FAM167BQ9BTA0 163 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
FXN-201ENST00000377270 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 L3MBTL1Q9Y468 752 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
FXN-201ENST00000377270 EIF4E1BA6NMX2 242 aaKnown RBP17■□□□□ 0.31
FXN-201ENST00000377270 MAP3K13O43283 966 aa17■□□□□ 0.31
FXN-201ENST00000377270 LGR5O75473 907 aa17■□□□□ 0.31
FXN-201ENST00000377270 LDHCP07864 332 aa17■□□□□ 0.31
FXN-201ENST00000377270 TSPY3P0CV98 308 aa17■□□□□ 0.31
FXN-201ENST00000377270 TSPY8P0CW00 308 aa17■□□□□ 0.31
FXN-201ENST00000377270 OLFML1Q6UWY5 402 aa17■□□□□ 0.31
FXN-201ENST00000377270 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
FXN-201ENST00000377270 IQCF2Q8IXL9 164 aa17■□□□□ 0.31
FXN-201ENST00000377270 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
FXN-201ENST00000377270 ZNF473Q8WTR7 871 aaKnown RBP17■□□□□ 0.31
FXN-201ENST00000377270 CPLX3Q8WVH0 158 aa17■□□□□ 0.31
FXN-201ENST00000377270 PAGE5Q96GU1 130 aa17■□□□□ 0.31
FXN-201ENST00000377270 ZWILCHQ9H900 591 aa17■□□□□ 0.31
FXN-201ENST00000377270 GALNT8Q9NY28 637 aa17■□□□□ 0.31
FXN-201ENST00000377270 MTMR7Q9Y216 660 aa17■□□□□ 0.31
FXN-201ENST00000377270 UFL1O94874 794 aa17■□□□□ 0.31
FXN-201ENST00000377270 ABL1P00519 1130 aa17■□□□□ 0.31
FXN-201ENST00000377270 DESP17661 470 aa17■□□□□ 0.31
FXN-201ENST00000377270 CASP1P29466 404 aa17■□□□□ 0.31
FXN-201ENST00000377270 PLCD1P51178 756 aa17■□□□□ 0.31
FXN-201ENST00000377270 PPP4CP60510 307 aa17■□□□□ 0.31
FXN-201ENST00000377270 ATP2C1P98194 919 aaPredicted RBP17■□□□□ 0.31
FXN-201ENST00000377270 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.312e-6■□□□□ 10
FXN-201ENST00000377270 SLC44A5Q8NCS7 719 aa17■□□□□ 0.31
FXN-201ENST00000377270 OSBPL1AQ9BXW6 950 aa17■□□□□ 0.31
FXN-201ENST00000377270 PREBQ9HCU5 417 aa17■□□□□ 0.31
FXN-201ENST00000377270 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
FXN-201ENST00000377270 WDR35Q9P2L0 1181 aa17■□□□□ 0.31
FXN-201ENST00000377270 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
FXN-201ENST00000377270 DNM1LO00429 736 aa17■□□□□ 0.31
FXN-201ENST00000377270 MFAP3LO75121 409 aa17■□□□□ 0.31
FXN-201ENST00000377270 MCM7P33993 719 aa17■□□□□ 0.31
FXN-201ENST00000377270 ABL2P42684 1182 aa17■□□□□ 0.31
FXN-201ENST00000377270 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
FXN-201ENST00000377270 HOOK3Q86VS8 718 aa17■□□□□ 0.31
FXN-201ENST00000377270 NME8Q8N427 588 aa17■□□□□ 0.31
FXN-201ENST00000377270 GPKOWQ92917 476 aaPredicted RBP eCLIP17■□□□□ 0.31
FXN-201ENST00000377270 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
FXN-201ENST00000377270 CD209Q9NNX6 404 aa17■□□□□ 0.31
FXN-201ENST00000377270 LY75O60449 1722 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 DPPA5A6NC42 116 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 TEX33O43247 280 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 CORO1BQ9BR76 489 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 SERPINB2P05120 415 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
FXN-201ENST00000377270 ADRA2BP18089 450 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 DPY19L2Q6NUT2 758 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
FXN-201ENST00000377270 SH3RF1Q7Z6J0 888 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 MED15Q96RN5 788 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 OCEL1Q9H607 264 aa16.99■□□□□ 0.31
FXN-201ENST00000377270 A6NNZ2 444 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 GYS1P13807 737 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 CALML3P27482 149 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms