RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 MYBL2P10244 700 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PRLRP16471 622 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 AMPD3Q01432 767 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L6PQ6QN14 398 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 TMCO3Q6UWJ1 677 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 KRT26Q7Z3Y9 468 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 CALML4Q96GE6 196 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 CCDC17Q96LX7 622 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 ANO3Q9BYT9 981 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 DEFB129Q9H1M3 183 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 ABCB6Q9NP58 842 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 KDM3AQ9Y4C1 1321 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 POTECB2RU33 542 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 E9PMD0 336 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 TBX3O15119 743 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PRPF6O94906 941 aaKnown RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PSMC6P62333 389 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 GIT2Q14161 759 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 SOGA3Q5TF21 947 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 STRA6Q9BX79 667 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 DHX36Q9H2U1 1008 aaKnown RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 TRAF3IP3Q9Y228 551 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 UTRNP46939 3433 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 OTOFQ9HC10 1997 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 ECE2O60344 883 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 SRGAP2O75044 1071 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 STAT3P40763 770 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 CACNB3P54284 484 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 TUBB4BP68371 445 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 TBC1D8BQ0IIM8 1120 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 TMEM174Q8WUU8 243 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 CEP63Q96MT8 703 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 GMLQ99445 158 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 PSTPIP2Q9H939 334 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 AJAP1Q9UKB5 411 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-202ENST00000376659 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-202ENST00000376659 ENC1O14682 589 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 JAM2P57087 298 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 APBA1Q02410 837 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 DYMQ7RTS9 669 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 SYT11Q9BT88 431 aa10.65□□□□□ -0.7
TRIM39-202ENST00000376659 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
TRIM39-202ENST00000376659 SSU72P8A0A1W2PR75 194 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 ZNF185O15231 689 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 KIF11P52732 1056 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 LRRC41Q15345 812 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 WDR18Q9BV38 432 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 SNX12Q9UMY4 172 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 FRMPD4Q14CM0 1322 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 SYF2O95926 243 aaKnown RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 ALDH1B1P30837 517 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 TNNI2P48788 182 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 GHRHRQ02643 423 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 NFIL3Q16649 462 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 EDRF1Q3B7T1 1238 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 ANKRD20A12PQ8NF67 263 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 ZBED3Q96IU2 234 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 DBNDD1Q9H9R9 158 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 PSD3Q9NYI0 1048 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 PCDHA13Q9Y5I0 950 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 NDUFB10O96000 172 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 PLA2G4BP0C869 781 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 TNFRSF8P28908 595 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 OAS2P29728 719 aaKnown RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 PDE6BP35913 854 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 SYT2Q8N9I0 419 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 AENQ8WTP8 325 aaKnown RBP10.64□□□□□ -0.71
TRIM39-202ENST00000376659 AIPL1Q9NZN9 384 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 CEP72Q9P209 647 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 GUCA1BQ9UMX6 200 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 COL4A3BPQ9Y5P4 624 aa10.64□□□□□ -0.71
TRIM39-202ENST00000376659 AGPSO00116 658 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MYBP10242 640 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 KRT83P78385 493 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 SLC15A2Q16348 729 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MMGT1Q8N4V1 131 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 NAP1L4Q99733 375 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 GPR88Q9GZN0 384 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 ARGLU1Q9NWB6 273 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 WRAP73Q9P2S5 460 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms