RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 UHRF1Q96T88 793 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-204ENST00000376643 INSL6Q9Y581 213 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 SLC12A7Q9Y666 1083 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 TTC28Q96AY4 2481 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 PRUNE2Q8WUY3 3088 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SP2Q02086 613 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SLC35G1Q2M3R5 365 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SEPT8Q92599 483 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 APBB2Q92870 758 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
HDAC6-204ENST00000376643 GPRASP2Q96D09 838 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
HDAC6-204ENST00000376643 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
HDAC6-204ENST00000376643 SPDYE3A6NKU9 549 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-204ENST00000376643 MAFGO15525 162 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 HOXC8P31273 242 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 MRPS9P82933 396 aaKnown RBP16.96■□□□□ 0.31
HDAC6-204ENST00000376643 CYFIP1Q7L576 1253 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 SAMD11Q96NU1 681 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 GPR20Q99678 358 aa16.96■□□□□ 0.31
HDAC6-204ENST00000376643 NRCAMQ92823 1304 aa16.96■□□□□ 0.3
HDAC6-204ENST00000376643 SORBS3O60504 671 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 GPNMBQ14956 572 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 TAF2Q6P1X5 1199 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 RSPH3Q86UC2 560 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 CERS4Q9HA82 394 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 ANO2Q9NQ90 1003 aa16.95■□□□□ 0.3
HDAC6-204ENST00000376643 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
HDAC6-204ENST00000376643 TRIP12Q14669 1992 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-204ENST00000376643 CHD9Q3L8U1 2897 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 MEIS2O14770 477 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 SLC27A2O14975 620 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 ERVK-21P61565 698 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 DEFB103AP81534 67 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 GRB10Q13322 594 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 PLEKHG4Q58EX7 1191 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 TRAF7Q6Q0C0 670 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 HLA-CQ95604 372 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 MYL10Q9BUA6 226 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
HDAC6-204ENST00000376643 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 MYH7BA7E2Y1 1941 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 VCANP13611 3396 aa16.94■□□□□ 0.3
HDAC6-204ENST00000376643 hCG_1984214I3L0E3 225 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 ZNF200P98182 395 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-204ENST00000376643 PTPROQ16827 1216 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 ZNF713Q8N859 430 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-204ENST00000376643 FANCBQ8NB91 859 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 DBF4BQ8NFT6 615 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 GPKOWQ92917 476 aaPredicted RBP eCLIP16.93■□□□□ 0.32e-6■■□□□ 12.7
HDAC6-204ENST00000376643 ERAP1Q9NZ08 941 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 TET1Q8NFU7 2136 aa16.93■□□□□ 0.3
HDAC6-204ENST00000376643 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
HDAC6-204ENST00000376643 RFXAPO00287 272 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 TREHO43280 583 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-204ENST00000376643 ARHGAP4P98171 946 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 MTMR1Q13613 665 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 KRT32Q14532 448 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
HDAC6-204ENST00000376643 PPP1R18Q6NYC8 613 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 TMTC3Q6ZXV5 915 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 RPAINQ86UA6 219 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 SRBD1Q8N5C6 995 aaKnown RBP16.92■□□□□ 0.3
HDAC6-204ENST00000376643 SEPT1Q8WYJ6 367 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 WNT8BQ93098 351 aa16.92■□□□□ 0.3
HDAC6-204ENST00000376643 LINC01553A4QN01 128 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 EPOPA6NHQ4 379 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 FOSP01100 380 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-204ENST00000376643 TCF7P36402 384 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-204ENST00000376643 SEMA3FQ13275 785 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 MBTPS1Q14703 1052 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 FAM43BQ6ZT52 329 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-204ENST00000376643 HEATR3Q7Z4Q2 680 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 MICU3Q86XE3 530 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 ZFP91Q96JP5 570 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-204ENST00000376643 YME1L1Q96TA2 773 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 SMARCAD1Q9H4L7 1026 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
HDAC6-204ENST00000376643 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 HMGB1P09429 215 aaKnown RBP16.9■□□□□ 0.3
HDAC6-204ENST00000376643 BMP1P13497 986 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 HTRA4P83105 476 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-204ENST00000376643 SP4Q02446 784 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms