RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 USP11P51784 963 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
ABCF1-202ENST00000376545 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 CAVIN3Q969G5 261 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 DEF6Q9H4E7 631 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 BTNL10A8MVZ5 291 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 TNNI2P48788 182 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 CCDC70Q6NSX1 233 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 SRLQ86TD4 932 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 CERS5Q8N5B7 392 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 GLT8D2Q9H1C3 349 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 EHD4Q9H223 541 aa11.79□□□□□ -0.52
ABCF1-202ENST00000376545 PHACTR2O75167 634 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 SLC1A4P43007 532 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 TNNT3P45378 269 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-202ENST00000376545 NAB2Q15742 525 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 EDRF1Q3B7T1 1238 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 GSPT2Q8IYD1 628 aaKnown RBP11.78□□□□□ -0.52
ABCF1-202ENST00000376545 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 MKL1Q969V6 931 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 C8orf37Q96NL8 207 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 NOX5Q96PH1 765 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-202ENST00000376545 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 PCDHGC5Q9Y5F6 944 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
ABCF1-202ENST00000376545 CYP11B2P19099 503 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 NNTQ13423 1086 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 SFMBT2Q5VUG0 894 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 PPP4R3CPQ6ZMV5 832 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 GANQ9H2C0 597 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 PSTPIP2Q9H939 334 aa11.78□□□□□ -0.52
ABCF1-202ENST00000376545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.52
ABCF1-202ENST00000376545 USP17L10C9JJH3 530 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 GTF2IP78347 998 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 ATP2B2Q01814 1243 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 RASSF7Q02833 373 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 SPIRE1Q08AE8 756 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 ARSHQ5FYA8 562 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 EMBQ6PCB8 327 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 CACNA2D4Q7Z3S7 1137 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 CCDC65Q8IXS2 484 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 GDF3Q9NR23 364 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 STIM2Q9P246 746 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 LCMT1Q9UIC8 334 aa11.77□□□□□ -0.52
ABCF1-202ENST00000376545 E9PMD0 336 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 TRAF5O00463 557 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 EPHB4P54760 987 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 SLC18A3Q16572 532 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 HHIPL2Q6UWX4 724 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 EIF6P56537 245 aaKnown RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 PICALMQ13492 652 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 GJA10Q969M2 543 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.53
ABCF1-202ENST00000376545 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-202ENST00000376545 GRID2IPA4D2P6 1211 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 CES2O00748 559 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 NCK2O43639 380 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 FAM182BQ5T319 152 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 FOXR1Q6PIV2 292 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 ETNPPLQ8TBG4 499 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 RBM12Q9NTZ6 932 aaKnown RBP11.76□□□□□ -0.53
ABCF1-202ENST00000376545 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 MYO1CO00159 1063 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
ABCF1-202ENST00000376545 DDR1Q08345 913 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 CCDC40Q4G0X9 1142 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 ALS2CLQ60I27 953 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
ABCF1-202ENST00000376545 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 LSM14BQ9BX40 385 aaKnown RBP11.76□□□□□ -0.53
ABCF1-202ENST00000376545 PLCB1Q9NQ66 1216 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
ABCF1-202ENST00000376545 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
ABCF1-202ENST00000376545 MEIS2O14770 477 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 TBX3O15119 743 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms