RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SPATA31C2B4DYI2 1134 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 SGSM2O43147 1006 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 DDAH1O94760 285 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 KCNQ1P51787 676 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 KRT40Q6A162 431 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 CTCFLQ8NI51 663 aaPredicted RBP26.79■■□□□ 1.88
C9orf47-202ENST00000375850 SENP7Q9BQF6 1050 aa26.79■■□□□ 1.88
C9orf47-202ENST00000375850 SMIM10L2AP0DMW4 78 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 SMIM10L2BP0DMW5 78 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 GNAQP50148 359 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 MRPS9P82933 396 aaKnown RBP26.78■■□□□ 1.88
C9orf47-202ENST00000375850 PLEKHG4Q58EX7 1191 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 TMCO2Q7Z6W1 182 aaPredicted RBP26.78■■□□□ 1.88
C9orf47-202ENST00000375850 GIMAP8Q8ND71 665 aaPredicted RBP26.78■■□□□ 1.88
C9orf47-202ENST00000375850 DBF4BQ8NFT6 615 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 IGDCC4Q8TDY8 1250 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 MAP4K1Q92918 833 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 RRP36Q96EU6 259 aaKnown RBP26.78■■□□□ 1.88
C9orf47-202ENST00000375850 SUGCTQ9HAC7 445 aa26.78■■□□□ 1.88
C9orf47-202ENST00000375850 PIK3CDO00329 1044 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SORBS3O60504 671 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 MKRN4PQ13434 485 aaPredicted RBP26.77■■□□□ 1.88
C9orf47-202ENST00000375850 HIC1Q14526 733 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 TCTN1Q2MV58 587 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 TMTC2Q8N394 836 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SMARCC2Q8TAQ2 1214 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SEPT8Q92599 483 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 GPKOWQ92917 476 aaPredicted RBP eCLIP26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SAMD11Q96NU1 681 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SENP2Q9HC62 589 aa26.77■■□□□ 1.88
C9orf47-202ENST00000375850 SEC63Q9UGP8 760 aaKnown RBP26.77■■□□□ 1.88
C9orf47-202ENST00000375850 HTRA4P83105 476 aaPredicted RBP26.76■■□□□ 1.87
C9orf47-202ENST00000375850 PCNX4Q63HM2 1172 aa26.76■■□□□ 1.87
C9orf47-202ENST00000375850 NLRX1Q86UT6 975 aa26.76■■□□□ 1.87
C9orf47-202ENST00000375850 MB21D2Q8IYB1 491 aaPredicted RBP26.76■■□□□ 1.87
C9orf47-202ENST00000375850 GDPD5Q8WTR4 605 aa26.76■■□□□ 1.87
C9orf47-202ENST00000375850 GPR20Q99678 358 aa26.76■■□□□ 1.87
C9orf47-202ENST00000375850 RNPEPQ9H4A4 650 aa26.76■■□□□ 1.87
C9orf47-202ENST00000375850 CASC1Q6TDU7 716 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 CYFIP1Q7L576 1253 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 SPRED2Q7Z698 418 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 ZNF654Q8IZM8 581 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 APBB2Q92870 758 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 CDHR1Q96JP9 859 aa26.75■■□□□ 1.87
C9orf47-202ENST00000375850 NECAB3Q96P71 396 aaPredicted RBP26.75■■□□□ 1.87
C9orf47-202ENST00000375850 TREHO43280 583 aa26.74■■□□□ 1.87
C9orf47-202ENST00000375850 ANTXR2P58335 489 aa26.74■■□□□ 1.87
C9orf47-202ENST00000375850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.74■■□□□ 1.87
C9orf47-202ENST00000375850 MYOCDQ8IZQ8 938 aa26.74■■□□□ 1.87
C9orf47-202ENST00000375850 SP7Q8TDD2 431 aaPredicted RBP26.74■■□□□ 1.87
C9orf47-202ENST00000375850 ZFP91Q96JP5 570 aaPredicted RBP26.74■■□□□ 1.87
C9orf47-202ENST00000375850 MYH7BA7E2Y1 1941 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 PTPRSQ13332 1948 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 FAM117BQ6P1L5 589 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 TMEM87BQ96K49 555 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 LY9Q9HBG7 655 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 MTUS1Q9ULD2 1270 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 BDP1A6H8Y1 2624 aa26.73■■□□□ 1.87
C9orf47-202ENST00000375850 XIRP2A4UGR9 3374 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 NRCAMQ92823 1304 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 CALM1P0DP23 149 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 CALM2P0DP24 149 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 CALM3P0DP25 149 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 SEMA3FQ13275 785 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 FBXO22Q8NEZ5 403 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 GPRASP2Q96D09 838 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 RTEL1Q9NZ71 1219 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 RBM8AQ9Y5S9 174 aaKnown RBP26.72■■□□□ 1.87
C9orf47-202ENST00000375850 TAF6LQ9Y6J9 622 aa26.72■■□□□ 1.87
C9orf47-202ENST00000375850 MCM5P33992 734 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 PTPROQ16827 1216 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 FAM26DQ5JW98 314 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 PIBF1Q8WXW3 757 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 TOP1MTQ969P6 601 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 SETD4Q9NVD3 440 aa26.71■■□□□ 1.87
C9orf47-202ENST00000375850 COL4A4P53420 1690 aaPredicted RBP26.7■■□□□ 1.87
C9orf47-202ENST00000375850 MEIS2O14770 477 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 ADAM17P78536 824 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 TAF2Q6P1X5 1199 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 USP17L6PQ6QN14 398 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 RPAINQ86UA6 219 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 BCAS3Q9H6U6 928 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 SUPT16HQ9Y5B9 1047 aaKnown RBP26.7■■□□□ 1.86
C9orf47-202ENST00000375850 REV3LO60673 3130 aa26.7■■□□□ 1.86
C9orf47-202ENST00000375850 CCDC69A6NI79 296 aa26.69■■□□□ 1.86
C9orf47-202ENST00000375850 LIFRP42702 1097 aa26.69■■□□□ 1.86
C9orf47-202ENST00000375850 NFXL1Q6ZNB6 911 aa26.69■■□□□ 1.86
C9orf47-202ENST00000375850 YME1L1Q96TA2 773 aa26.69■■□□□ 1.86
C9orf47-202ENST00000375850 UBE2ZQ9H832 354 aaPredicted RBP26.69■■□□□ 1.86
C9orf47-202ENST00000375850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.68■■□□□ 1.86
C9orf47-202ENST00000375850 MAFGO15525 162 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 PRC1O43663 620 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 RPLP2P05387 115 aaKnown RBP26.68■■□□□ 1.86
C9orf47-202ENST00000375850 CTSHP09668 335 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 UTP14CQ5TAP6 766 aaKnown RBP26.68■■□□□ 1.86
C9orf47-202ENST00000375850 TEX2Q8IWB9 1127 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 LMBR1Q8WVP7 490 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 MRPL38Q96DV4 380 aaKnown RBP26.68■■□□□ 1.86
C9orf47-202ENST00000375850 C17orf80Q9BSJ5 609 aa26.68■■□□□ 1.86
C9orf47-202ENST00000375850 PSTPIP2Q9H939 334 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms