RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 VEZTQ9HBM0 779 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 FRMPD2Q68DX3 1309 aaPredicted RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 USP17L5A8MUK1 530 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 TACC1O75410 805 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 PDHBP11177 359 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PLCG2P16885 1265 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 TNFRSF8P28908 595 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 CARSP49589 748 aaKnown RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 EMC10Q5UCC4 262 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 C6orf89Q6UWU4 347 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 ZSCAN5CA6NGD5 496 aaPredicted RBP14.25□□□□□ -0.13
MSH5-204ENST00000375755 NCK2O43639 380 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
MSH5-204ENST00000375755 IL17AQ16552 155 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 TTC38Q5R3I4 469 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 DACT2Q5SW24 774 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 C8orf74Q6P047 294 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 NFU1Q9UMS0 254 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 GLI1P08151 1106 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 PRLRP16471 622 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
MSH5-204ENST00000375755 DNM2P50570 870 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 ZBED6P86452 979 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
MSH5-204ENST00000375755 SPRED3Q2MJR0 410 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 CCDC181Q5TID7 509 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 FAM228AQ86W67 206 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 RMND1Q9NWS8 449 aa14.25□□□□□ -0.13
MSH5-204ENST00000375755 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
MSH5-204ENST00000375755 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 BMP15O95972 392 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 GABPAQ06546 454 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 HEATR3Q7Z4Q2 680 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 TEKT1Q969V4 418 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 TSGA10Q9BZW7 698 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 DDX20Q9UHI6 824 aaKnown RBP14.24□□□□□ -0.13
MSH5-204ENST00000375755 HYOU1Q9Y4L1 999 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 PALM3A6NDB9 673 aaPredicted RBP14.24□□□□□ -0.13
MSH5-204ENST00000375755 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 E7EVH7 732 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 FAM107AO95990 144 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 XBP1P17861 261 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 KIF5BP33176 963 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 SATB1Q01826 763 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 PPARDQ03181 441 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 CEP57Q86XR8 500 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 EXOC1Q9NV70 894 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 MYH10P35580 1976 aa14.24□□□□□ -0.13
MSH5-204ENST00000375755 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 TCP1P17987 556 aaKnown RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 SPA17Q15506 151 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 PODNQ7Z5L7 613 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 CCDC114Q96M63 670 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 DNAJC18Q9H819 358 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 GGA2Q9UJY4 613 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
MSH5-204ENST00000375755 SHMT1P34896 483 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 GUCY2FP51841 1108 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 IFT81Q8WYA0 676 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 MS4A14Q96JA4 679 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 ATP6V1G3Q96LB4 118 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 CCDC42Q96M95 316 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 TUBGCP2Q9BSJ2 902 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 IFIH1Q9BYX4 1025 aaKnown RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 PCDHA13Q9Y5I0 950 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 CDR1P51861 262 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 SNCBQ16143 134 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 PARP9Q8IXQ6 854 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 PCMTD1Q96MG8 357 aaPredicted RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 GDF3Q9NR23 364 aa14.23□□□□□ -0.13
MSH5-204ENST00000375755 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
MSH5-204ENST00000375755 DNM1LO00429 736 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 MPHOSPH10O00566 681 aaKnown RBP14.22□□□□□ -0.13
MSH5-204ENST00000375755 USO1O60763 962 aaKnown RBP14.22□□□□□ -0.13
MSH5-204ENST00000375755 PAX7P23759 505 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 MCM7P33993 719 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
MSH5-204ENST00000375755 PPP2R5AQ15172 486 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 CYB5D1Q6P9G0 228 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 GPIHBP1Q8IV16 184 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 CD302Q8IX05 232 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms