RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZMYND12Q9H0C1 365 aa15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 PACSIN2Q9UNF0 486 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 COL11A2P13942 1736 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-202ENST00000375692 PJA2O43164 708 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 SKOR1P84550 965 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 KCNMA1Q12791 1236 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 PDXDC1Q6P996 788 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 NEK8Q86SG6 692 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 CCDC84Q86UT8 332 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 DZIP1Q86YF9 867 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 ANKS1AQ92625 1134 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 PNMA5Q96PV4 448 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 SAP30BPQ9UHR5 308 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-202ENST00000375692 HEXIM1O94992 359 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 INPP5BP32019 993 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 GUCY1A3Q02108 690 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 ENOX2Q16206 610 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 DOK7Q18PE1 504 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 CFAP221Q4G0U5 840 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 USP17L2Q6R6M4 530 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 KRT25Q7Z3Z0 450 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 IQCKQ8N0W5 287 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 UPF1Q92900 1129 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 NUDT12Q9BQG2 462 aa15.58■□□□□ 0.08
CLCNKA-202ENST00000375692 TLR2O60603 784 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 PALMO75781 387 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 CFAP58Q5T655 872 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 DPP8Q6V1X1 898 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 ZNF804AQ7Z570 1209 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 IFT20Q8IY31 132 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 RUBCNQ92622 972 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 KRT12Q99456 494 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 MYH1P12882 1939 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 PPP1R2P41236 205 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 ARID5AQ03989 594 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 LRRC55Q6ZSA7 311 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 UNC13DQ70J99 1090 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 GDF3Q9NR23 364 aa15.57■□□□□ 0.08
CLCNKA-202ENST00000375692 HNRNPH1P31943 449 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 DIXDC1Q155Q3 683 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 TGFBRAP1Q8WUH2 860 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 CASKIN2Q8WXE0 1202 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 IQCDQ96DY2 449 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 POTEMA6NI47 508 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 COBLL1Q53SF7 1204 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 C15orf52Q6ZUT6 534 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
CLCNKA-202ENST00000375692 KIAA1551Q9HCM1 1747 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 NOL4O94818 638 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 KLRC1P26715 233 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 TNFRSF8P28908 595 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 EHHADHQ08426 723 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 GUF1Q8N442 669 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 PROCA1Q8NCQ7 364 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 LARP4BQ92615 738 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 PIGSQ96S52 555 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 MXD3Q9BW11 206 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 UBA5Q9GZZ9 404 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 SLX4Q8IY92 1834 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 C21orf2O43822 256 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 SLC37A4O43826 429 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 SEC24CP53992 1094 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 IRX3P78415 501 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 STYK1Q6J9G0 422 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 MAPKAPK5Q8IW41 473 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 DDX12PQ92771 950 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 GJA10Q969M2 543 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 PPP1R1BQ9UD71 204 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 CAPN7Q9Y6W3 813 aa15.55■□□□□ 0.08
CLCNKA-202ENST00000375692 LAMB1P07942 1786 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 TDP2O95551 362 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 DPEP1P16444 411 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 RASA1P20936 1047 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 KCNA3P22001 575 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 LSP1P33241 339 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 POLR2FP61218 127 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 GTF2IP78347 998 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 CALCRLQ16602 461 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 GLE1Q53GS7 698 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 FAM83BQ5T0W9 1011 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 SOGA3Q5TF21 947 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 RNF10Q8N5U6 811 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 UIMC1Q96RL1 719 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 PVALEFA0A1B0GWK0 134 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms