RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 XDHP47989 1333 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 CCDC188H7C350 402 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 N4BP1O75113 896 aaKnown RBP18.31■□□□□ 0.52
VARS-215ENST00000375663 SUN1O94901 812 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 SLCO1A2P46721 670 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 KCNQ4P56696 695 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 ICA1Q05084 483 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
VARS-215ENST00000375663 HIBCHQ6NVY1 386 aaPredicted RBP18.31■□□□□ 0.52
VARS-215ENST00000375663 CCDC13Q8IYE1 715 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 ACTR5Q9H9F9 607 aaPredicted RBP18.31■□□□□ 0.52
VARS-215ENST00000375663 CD2APQ9Y5K6 639 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
VARS-215ENST00000375663 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
VARS-215ENST00000375663 NT5C2P49902 561 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 MYL7Q01449 175 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 PROM2Q8N271 834 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 CNOT10Q9H9A5 744 aaKnown RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 MUM1L1Q5H9M0 696 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 MIER3Q7Z3K6 550 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 KIFC2Q96AC6 838 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 PNKPQ96T60 521 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 MAP3K14Q99558 947 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 TRIM9Q9C026 710 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 CCSER1Q9C0I3 900 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 RPSAP08865 295 aaKnown RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 SRGNP10124 158 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 BEND6Q5SZJ8 279 aaPredicted RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 VPS52Q8N1B4 723 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 TSNARE1Q96NA8 513 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 RASSF2P50749 326 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 MAK16Q9BXY0 300 aaKnown RBP18.3■□□□□ 0.52
VARS-215ENST00000375663 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
VARS-215ENST00000375663 PRPF6O94906 941 aaKnown RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 FGGP02679 453 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 ZKSCAN8Q15776 578 aaPredicted RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 ANKRD20A3Q5VUR7 823 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 PPP1R3GB7ZBB8 358 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 TRIM37O94972 964 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 EIF3BP55884 814 aaKnown RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 ILDR1Q86SU0 546 aaPredicted RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 TYW1Q9NV66 732 aaKnown RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 PACSIN2Q9UNF0 486 aaPredicted RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 MROH1Q8NDA8 1641 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 ORC4O43929 436 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 TNNI1P19237 187 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 CAPN12Q6ZSI9 719 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 KSR1Q8IVT5 923 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
VARS-215ENST00000375663 GRK7Q8WTQ7 553 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 HPS3Q969F9 1004 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
VARS-215ENST00000375663 TOM1O60784 492 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 CCDC62Q6P9F0 684 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 CCDC160A6NGH7 325 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 PSMD14O00487 310 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 ATF2P15336 505 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 GAP43P17677 238 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 PDE6CP51160 858 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 DR1Q01658 176 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 STRN3Q13033 797 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 GRM4Q14833 912 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 CCDC38Q502W7 563 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 LRCH2Q5VUJ6 765 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 NSMFQ6X4W1 530 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 CEP63Q96MT8 703 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
VARS-215ENST00000375663 KCNH2Q12809 1159 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 DDX47Q9H0S4 455 aaKnown RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 L1RE1Q9UN81 338 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 CIB2O75838 187 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 TOB1P50616 345 aaPredicted RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 CELF1Q92879 486 aaKnown RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 KLHL29Q96CT2 875 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 TFR2Q9UP52 801 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 CD44P16070 742 aaKnown RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 HSPA6P17066 643 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 STK4Q13043 487 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.52
VARS-215ENST00000375663 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
VARS-215ENST00000375663 RHOBTB3O94955 611 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms