RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 APBA1Q02410 837 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 MFSD14BQ5SR56 506 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 SIK3Q9Y2K2 1263 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 G3V3G9 751 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 C21orf2O43822 256 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 OR52Z1P0C646 297 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 TFAP4Q01664 338 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CEP89Q96ST8 783 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CUEDC2Q9H467 287 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 SH3GLB2Q9NR46 395 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 FLT1P17948 1338 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 MYO1FO00160 1098 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 HNRNPH3P31942 346 aaKnown RBP12.23□□□□□ -0.45
CCDC40-203ENST00000374877 GTF2IP78347 998 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 AMPD3Q01432 767 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 PAK2Q13177 524 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 RNF187Q5TA31 235 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-203ENST00000374877 CCDC91Q7Z6B0 441 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 CENPHQ9H3R5 247 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 GAKO14976 1311 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 BAG3O95817 575 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 LSP1P33241 339 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 KLHDC7AQ5VTJ3 777 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 DYMQ7RTS9 669 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 CCDC84Q86UT8 332 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-203ENST00000374877 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 A6NNZ2 444 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 FTCDO95954 541 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
CCDC40-203ENST00000374877 STRIP1Q5VSL9 837 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 IQCDQ96DY2 449 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 KRT12Q99456 494 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 C7orf25Q9BPX7 421 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 MAGEF1Q9HAY2 307 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
CCDC40-203ENST00000374877 M0R2N6 131 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 LAD1O00515 517 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 MEFVO15553 781 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 NR1D1P20393 614 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 PPP1R2P41236 205 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 SETQ01105 290 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 ENOX2Q16206 610 aaKnown RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 SWT1Q5T5J6 900 aaKnown RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 CPVLQ9H3G5 476 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 GPR75-ASB3A0A0A6YYF3 556 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 ECE2O60344 883 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 SEC24CP53992 1094 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 GRIK5Q16478 980 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 CALML4Q96GE6 196 aa12.22□□□□□ -0.45
CCDC40-203ENST00000374877 PACSIN2Q9UNF0 486 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-203ENST00000374877 PLCG2P16885 1265 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 HPDP32754 393 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-203ENST00000374877 PRPHP41219 470 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 GLE1Q53GS7 698 aaKnown RBP12.21□□□□□ -0.45
CCDC40-203ENST00000374877 NAA35Q5VZE5 725 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 AK8Q96MA6 479 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 MRIQ9BWK5 157 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 PALMO75781 387 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 LCA5LO95447 670 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 NAPAP54920 295 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 CENPPQ6IPU0 288 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 KDM7AQ6ZMT4 941 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 MICALCLQ6ZW33 695 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 IQCKQ8N0W5 287 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 CNPY4Q8N129 248 aa12.21□□□□□ -0.45
CCDC40-203ENST00000374877 ARPP21Q9UBL0 812 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-203ENST00000374877 USP17L3A6NCW0 530 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 USP17L4A6NCW7 530 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 STXBP3O00186 592 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 PPIP5K2O43314 1243 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 CYTH3O43739 400 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 TXKP42681 527 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 NT5C2P49902 561 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 ARID5AQ03989 594 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.46
CCDC40-203ENST00000374877 TRADDQ15628 312 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 SV2BQ7L1I2 683 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 BAP1Q92560 729 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 CABS1Q96KC9 395 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 EPN3Q9H201 632 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 IL17RBQ9NRM6 502 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 BARHL2Q9NY43 387 aa12.21□□□□□ -0.46
CCDC40-203ENST00000374877 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms