RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 FAM8A1Q9UBU6 413 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 KIF24Q5T7B8 1368 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 TTC4O95801 387 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 STXBP2Q15833 593 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 HSP90AA4PQ58FG1 418 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 TWF2Q6IBS0 349 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 PDZD4Q76G19 769 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 TPCN1Q9ULQ1 816 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 HYOU1Q9Y4L1 999 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 UBN2Q6ZU65 1347 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 ZMYND10O75800 440 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 PRPF6O94906 941 aaKnown RBP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 AMHP03971 560 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 ELF2Q15723 593 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 SFMBT2Q5VUG0 894 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 CCDC105Q8IYK2 499 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 VPS33BQ9H267 617 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 MINPP1Q9UNW1 487 aa6.85□□□□□ -1.31
PTPN3-202ENST00000374541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPN3-202ENST00000374541 OPHN1O60890 802 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ESRRGP62508 458 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 TMEM179Q6ZVK1 233 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 KRT25Q7Z3Z0 450 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PEX26Q7Z412 305 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SLAIN1Q8ND83 568 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ZKSCAN4Q969J2 545 aaPredicted RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 DCTPP1Q9H773 170 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SLC4A7Q9Y6M7 1214 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 CAPN7Q9Y6W3 813 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 EFCAB8A8MWE9 144 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 EIF3CLB5ME19 914 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 GAS7O60861 476 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 P4HA1P13674 534 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 TCP1P17987 556 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ASPHQ12797 758 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 COG2Q14746 738 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 RPS6KA2Q15349 733 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ENGASEQ8NFI3 743 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 TSC1Q92574 1164 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 RILPQ96NA2 401 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 EIF3CQ99613 913 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PCDHB12Q9Y5F1 795 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ZNF532Q9HCE3 1301 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ARHGAP42A6NI28 874 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 N4BP1O75113 896 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PDE8BO95263 885 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 TTLL1O95922 423 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 CTNNA1P35221 906 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PRMT2P55345 433 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SDE2Q6IQ49 451 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 RASEFQ8IZ41 740 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 LARP6Q9BRS8 491 aaKnown RBP6.84□□□□□ -1.31
PTPN3-202ENST00000374541 RIPOR2Q9Y4F9 1068 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 RNF8O76064 485 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SLC25A27O95847 323 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 ZAP70P43403 619 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SLMAPQ14BN4 828 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PPP1R2P3Q6NXS1 205 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SUCLG2Q96I99 432 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 TMEM39BQ9GZU3 492 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 VPS37BQ9H9H4 285 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 AMFRQ9UKV5 643 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 SAR1BQ9Y6B6 198 aa6.84□□□□□ -1.31
PTPN3-202ENST00000374541 PFDN1O60925 122 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 GJB1P08034 283 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 SRGNP10124 158 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 GARSP41250 739 aaKnown RBP6.84□□□□□ -1.32
PTPN3-202ENST00000374541 ADCY7P51828 1080 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 GNGT1P63211 74 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 KLHL30Q0D2K2 578 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 NCAPH2Q6IBW4 605 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 DCUN1D2Q6PH85 259 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 BANK1Q8NDB2 785 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 DACT3Q96B18 629 aaPredicted RBP6.84□□□□□ -1.32
PTPN3-202ENST00000374541 DPP7Q9UHL4 492 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 MYO3AQ8NEV4 1616 aa6.84□□□□□ -1.32
PTPN3-202ENST00000374541 FAM196BA6NMK8 535 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 IGHDP01880 384 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 DEUP1Q05D60 604 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 RASIP1Q5U651 963 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 RPAINQ86UA6 219 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 EFCAB13Q8IY85 973 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 CAPS2Q9BXY5 557 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 INO80BQ9C086 356 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 ACAD9Q9H845 621 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SYN1P17600 705 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 ANXA13P27216 316 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 EFHD1Q9BUP0 239 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 CCDC68Q9H2F9 335 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SEPT9Q9UHD8 586 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TULP4Q9NRJ4 1543 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SPECC1L-ADORA2AF8WAN1 911 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 FOSL2P15408 326 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 APOBRQ0VD83 1088 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 KCTD1Q719H9 257 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 CATSPER4Q7RTX7 472 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 MB21D1Q8N884 522 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms